Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00163 ATGGCTTCAATCACACACTACACCAGTTTCATATGCAAACCCCCCACCCCTTCTTCAAAGTTCCTTCCTCTTCATTCCCTTCGTCCTTCTTTACCCAACTTTCACACTAAAACTAAAATCCATTCTCATCTCCAGAGACGTCTTTCTATCACCAAAGCAACAGCAGCTCCTCCTTCAGGTGCTGAAGCAGCTGCCAAGAAAAAAGATGAAAGAGTTCAGCGAGTCCATAGCATAGAAGAATTCGACGAAGCACTTCAATCAGCAAAAGACAAACTCGTTGTTGTTGAATACGCCACCAGCGATGATTCAGAAAGCATCGAGATATACCCTTTCTTAGTCGATCTCAGTCGAACCTGTAATGACGTCAAATTCTTACTTGTTATGGGAGATGAATCAGAGAAAACAAAAGAACTCTGTAAAAGAGAGAAAGTAGATAAAGTACCTCACTTCACTTTCTACAAAAGCAAAGAAAAGATTCACGAAGAAGAAGCTATTGGTCCAGATACACTTGTTGGAGATGTGTTATACTACGGTGATAACCATTCTGCTGTCGTGCAACTGCATAACAGAGAAGATGTTGAGAAACTTATTGAGGATCATAAAGTTGATCATAAACTTATTGTCCTTGATGTTGGACTCAAACATTGTGGGCCGTGTGTTAAGGTTTATCCGACAGTGATTAAGCTGTCTCGACAAATGAGTGACACGGTTGTGTTTGCGAGGATGAATGGAGATGAGAATGATAGCTGTATGCAGTTTTTGAAGGACATGGAAGTGATTCAAGTGCCTACGTTTTTGTTCATAAGAGATGGTAAGATTGATGGAAGGTATGTTGGTTCAGGGAAAGGAGAACTCATTGGTGAAATCCTTAGGTACCAAGGGGTGCGTGTCACTTATTAA 900 0.4089 MASITHYTSFICKPPTPSSKFLPLHSLRPSLPNFHTKTKIHSHLQRRLSITKATAAPPSGAEAAAKKKDERVQRVHSIEEFDEALQSAKDKLVVVEYATSDDSESIEIYPFLVDLSRTCNDVKFLLVMGDESEKTKELCKREKVDKVPHFTFYKSKEKIHEEEAIGPDTLVGDVLYYGDNHSAVVQLHNREDVEKLIEDHKVDHKLIVLDVGLKHCGPCVKVYPTVIKLSRQMSDTVVFARMNGDENDSCMQFLKDMEVIQVPTFLFIRDGKIDGRYVGSGKGELIGEILRYQGVRVTY 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00163 299 Pfam Thioredoxin 76 162 IPR013766 -
Tsu01g00163 299 Pfam Thioredoxin 195 284 IPR013766 -
Tsu01g00163 299 SUPERFAMILY Thioredoxin-like 64 166 IPR036249 -
Tsu01g00163 299 Gene3D Glutaredoxin 60 175 - -
Tsu01g00163 299 PANTHER THIOREDOXIN-LIKE PROTEIN CDSP32, CHLOROPLASTIC 18 299 IPR044192 GO:0016671
Tsu01g00163 299 SUPERFAMILY Thioredoxin-like 178 286 IPR036249 -
Tsu01g00163 299 Gene3D Glutaredoxin 177 293 - -
Tsu01g00163 299 ProSiteProfiles Thioredoxin domain profile. 153 295 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00163 Tsu-Chr1 1277529 1279158 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00163 - - cam:101508233 481.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00163 01 1277529 1279158 Tsu01g00163 01 1277529 1279158 ECH