Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00161 ATGGTGGGAGATACAGAGAGTTGCAACGGTAGAGCTTTGATTAACTGTGGTGGTGGTCGAATTGAGAGTCTAAAAGTTGAGGTTTACAGCGAGATTCTCAGTCGACTCAGAGAATTGAATGTTCCAGAGGCCACTCTTCCTTATTTTGAAGACGAGCTTTGGGTTCACTTCAATACCCTTCCAACTAGGTATGCACTGGAAATGAATGTTGAGAAGGCCCAAGATGTTcttatgcataaaaatttacaaaatatggCACGAACTATTGCTAGTAGACCTGCAATTGAAGTCCGCCTCGTCCAGgttCGTTCTGCTTCTGGTGTGCATGCTAGAAAATCCATTAATTCCAACTTACAGAAAGAAATCAATCTCCAAGACTCTGATTTTCCAAGCAACATGAGGCATGATTATCTGACTACCTTACTCTCTGAGATTGGGCTGAATATTCAAGAAGCACATGCCTTCTCCACAGTGGATGGATATTCATtagatgtttttgttgttgatggttGGACAGGCCagGATACTGAGAGACTCAAGCATGAAGTGGCAAAGAAAATGCAGAAACTAGAGGAAGATCAATGGCTCCCCCTGCTCCCTTTTCCCAAGGAGACTGGGATGCTAAAACATATTGCaacaaagaaaattaagaaaatcGAGCCCTGGTGCATTCTTCCTAAGGAGAAACCAGAGAAAATTTTGATGAACTATATCTCTAACCATGTAAACAAACCCATCAGTAGAAATTATGTGTGGGAAATTGATGCAAGCTGTTTAAGATATGAGAAGAAAATTGGCTCTGGATCAGTCAGTGATTTGTACAAAGGTACTTACATTAATAAAGATGTGGCCATCAAAGTATTTAAGAATGGTAGTCTAAATGAAAATATGCAGAGGGAGTTTTCTCAAGAAATATTTATCACGAGTAAAGTTCAGCATAAGAATGTTATCAAATTTATCGGTGCCTGTGCAAAACCAAACTTTCATCTTGTCACAGAATATATGTCTGGTGGAAATATGTACGACTTTCTGCATATACAGAAGGTTGTACTTACTCTTCCTTCTTTGCTCAAAATAGCAATTGATGTCTCCCAAGGAGTGAATTATTtacacaaaaacaacattataCATCGAGACCTCAAAACTGCAAATCTTTTGATGGATGAGAAAGGGGTAGTCAAAGTTGCTGATTTTGGTGTAGCTAGATTGCAAAATCAATCTGGTATAATGACTGCAGAAACTGGAACATACCGATGGATGGCTCCAGAGGTTATTCAACATAAGCCATATAATCACAAAGCTGATATTTTCAGTTTTGGGATTATTCTTTGGGAGCTGCTCACAAGAAAGCTTCCCTATGAAGATCTATCCCCATTGCAAGCAGCAATTGGAGTAGTACATAAGGATTTGAGGCCTGAAATCCCAAGGGATACTCATCCAAAGTTAGTGGAATTGATTCACCGGTGCTGGCATAAAGATCCGTGTTTAAGGCCCGATTTCTCAGAAATTCTCAAGTTTCTGCAGCACATTAACAACATGATAGcagggaagaagaagaaggttaAGGTTAAGGTTAAGGCTAGGGCTAAGGCTAAAGGAATGCATGAGCACAACTAA 1617 0.3748 MVGDTESCNGRALINCGGGRIESLKVEVYSEILSRLRELNVPEATLPYFEDELWVHFNTLPTRYALEMNVEKAQDVLMHKNLQNMARTIASRPAIEVRLVQVRSASGVHARKSINSNLQKEINLQDSDFPSNMRHDYLTTLLSEIGLNIQEAHAFSTVDGYSLDVFVVDGWTGQDTERLKHEVAKKMQKLEEDQWLPLLPFPKETGMLKHIATKKIKKIEPWCILPKEKPEKILMNYISNHVNKPISRNYVWEIDASCLRYEKKIGSGSVSDLYKGTYINKDVAIKVFKNGSLNENMQREFSQEIFITSKVQHKNVIKFIGACAKPNFHLVTEYMSGGNMYDFLHIQKVVLTLPSLLKIAIDVSQGVNYLHKNNIIHRDLKTANLLMDEKGVVKVADFGVARLQNQSGIMTAETGTYRWMAPEVIQHKPYNHKADIFSFGIILWELLTRKLPYEDLSPLQAAIGVVHKDLRPEIPRDTHPKLVELIHRCWHKDPCLRPDFSEILKFLQHINNMIAGKKKKVKVKVKARAKAKGMHEHN 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00161 538 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 138 510 - -
Tsu01g00161 538 Gene3D Phosphorylase Kinase; domain 1 250 336 - -
Tsu01g00161 538 SUPERFAMILY Protein kinase-like (PK-like) 235 507 IPR011009 -
Tsu01g00161 538 Pfam Protein tyrosine and serine/threonine kinase 260 507 IPR001245 GO:0004672|GO:0006468
Tsu01g00161 538 CDD STKc_MAP3K-like 265 507 - -
Tsu01g00161 538 ProSiteProfiles Protein kinase domain profile. 259 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g00161 538 ProSitePatterns Serine/Threonine protein kinases active-site signature. 375 387 IPR008271 GO:0004672|GO:0006468
Tsu01g00161 538 SMART serkin_6 259 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g00161 538 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 138 510 - -
Tsu01g00161 538 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 18 133 - -
Tsu01g00161 538 Gene3D Transferase(Phosphotransferase) domain 1 337 538 - -
Tsu01g00161 538 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 18 133 - -
Tsu01g00161 538 PRINTS Tyrosine kinase catalytic domain signature 369 387 IPR001245 GO:0004672|GO:0006468
Tsu01g00161 538 PRINTS Tyrosine kinase catalytic domain signature 434 456 IPR001245 GO:0004672|GO:0006468
Tsu01g00161 538 PRINTS Tyrosine kinase catalytic domain signature 478 500 IPR001245 GO:0004672|GO:0006468
Tsu01g00161 538 PRINTS Tyrosine kinase catalytic domain signature 415 425 IPR001245 GO:0004672|GO:0006468
Tsu01g00161 538 PRINTS Tyrosine kinase catalytic domain signature 332 345 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00161 Tsu-Chr1 1265292 1271455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00161 4 510 MAP Kinase Kinase Kinase AT2G17700 48.479 4.18e-179 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Tsu01g00161 PK_Tyr_Ser-Thr 9.2e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00161 - - mtr:MTR_1g026160 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00161 01 1265292 1271455 Tsu01g00161 01 1265292 1271455 ECH