Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00155 aTGGAGGAGGTCGAGAATAGTAGAAGAATGATCGACCCAAGAAGTGGGTTCTGCAGCTCCAATTCAATATTCTACAGTAAGAGGAAACCCCTTCCACTCCCTCCAAACCACTCCTTAGATGCCACCACTTTCATCTCCTCCCGCCCCCATCACGGCCGCATCGCCTTCATCGACGCCTCCACCGCCCGTCAATTCACCTACCAACAACTCTGGCGAGCCGTAGAAGCAGTCACCTCCTCTCTCTCCAACATGGGAATCCGTAAAGGTGACGTCATCCTCCTCCTCTCTCCCAACTCCATATACTTTCCTGTGGTGTGTCTCTCCGTCATCTCCCTCGGCGccatcatcaccaccaccaaTCCCCTCAACACAACACGTGAAATTGCAAAGCAGATCGCTGATTCTAAACCCGTCCTCGCCTTCACAACCCCTCCACTCGTTTCAAAAATCACCGGAGCATCGCCTTCACTCCCAATTATTCTCATGGAGACCGACGGgcactcatcatcatcatcaaacacaCTGGAGGAAATGATGAAGAAACAACCCGAGTTGAGTAGAGTGAGGGAGCGAGTCAACCAGGACGACACTGCTACTCTGCTTTACTCATCTGGAACGACCGGACCCAGCAAAGGAGTAATATCTTCGCAAAGGAACCTCATAGCGATGGTTCAAATCGTATTGGCTAGGTTCAGCaggaaggaagaagaagaacaaacaTTCATATGCACGGTTCCAATGTTTCATATATACGGTCTTGCTGTGTTTGCTATGGGGGTTCTCGCTTTAGGTTCAACCACCGTTGTTCTCTCCAAGTTCGAGATGAACGATATGCTTTTATCCATTCAGAAATTCAAAGCATCCTACCTGCCGCTTGTGCCGCCCATACTGGTGGCTATGCTGAACAACGCGGATGCAATTAAGAGCAAGTATGATCTGAGTTCCCTTCACGCGGTGATCTGTGGAGGGGCTCCTCTGAGCAAAGAAGTTACGGAAGGGTTTATTGAAAAGTACCCAAACGTTAGTATATTTCAGGGATATGGTCTGACGGAATCCTCTGGAGTTGGGAGTTCCACTGAATCTTTGGAAGAGACTCGTAAGTACGGCACGGCTGGGCTTGTTTCTGCTTCCACGGAGGCTATGATTGTTGACACTGAAACTGCTCAACCTTTGCCGGTTAATCGGACCGGTGAGCTTTGGCTCAGGGGTCCCACCATCATGAAAGGTTATTTCAGTAACGAAGAGGCAACTACATCAACCCTTACTTCAGAGGGTTGGTTAAAAACAGGGGATATTTGCTATATTGATACCGATGGATTCTTATTTGTGGTGGATCGCTTGAAAGAGCTCATTAAATACAAAGGATATCAGGTCCCTCCAGCAGAACTAGAGGCTTTGTTGCTCACCCATCCTTCTATTTTAGATGCTGCTGTCATACCGTATCCAGATAAGGAGGCAGGGCAATATCCACTGGCATATGTCGTGAGGAAGACCGGAAGTAATCTTTCAGAAAGCCAAGTTATGGATTTTGTTGCAGAGcagGTGGCTCCGTACAAAAGAATTCGAAAAGTGGCATTCATATCTTCCATACCTAAAAATCCGTCTGGTAAAATTCTTCGAAAGGATCTCATCAAACTCGCTACGTCTAAGCTTTGA 1656 0.4577 MEEVENSRRMIDPRSGFCSSNSIFYSKRKPLPLPPNHSLDATTFISSRPHHGRIAFIDASTARQFTYQQLWRAVEAVTSSLSNMGIRKGDVILLLSPNSIYFPVVCLSVISLGAIITTTNPLNTTREIAKQIADSKPVLAFTTPPLVSKITGASPSLPIILMETDGHSSSSSNTLEEMMKKQPELSRVRERVNQDDTATLLYSSGTTGPSKGVISSQRNLIAMVQIVLARFSRKEEEEQTFICTVPMFHIYGLAVFAMGVLALGSTTVVLSKFEMNDMLLSIQKFKASYLPLVPPILVAMLNNADAIKSKYDLSSLHAVICGGAPLSKEVTEGFIEKYPNVSIFQGYGLTESSGVGSSTESLEETRKYGTAGLVSASTEAMIVDTETAQPLPVNRTGELWLRGPTIMKGYFSNEEATTSTLTSEGWLKTGDICYIDTDGFLFVVDRLKELIKYKGYQVPPAELEALLLTHPSILDAAVIPYPDKEAGQYPLAYVVRKTGSNLSESQVMDFVAEQVAPYKRIRKVAFISSIPKNPSGKILRKDLIKLATSKL 551
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00155 551 Pfam AMP-binding enzyme C-terminal domain 462 537 IPR025110 -
Tsu01g00155 551 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 550 - -
Tsu01g00155 551 CDD 4CL 33 543 - -
Tsu01g00155 551 ProSitePatterns Putative AMP-binding domain signature. 200 211 IPR020845 -
Tsu01g00155 551 SUPERFAMILY Acetyl-CoA synthetase-like 48 548 - -
Tsu01g00155 551 Gene3D - 21 448 IPR042099 -
Tsu01g00155 551 Gene3D - 449 550 IPR045851 -
Tsu01g00155 551 Pfam AMP-binding enzyme 49 453 IPR000873 -
Tsu01g00155 551 PANTHER 4-COUMARATE--COA LIGASE-LIKE 3-RELATED 11 550 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tsu01g00155 Tsu-Chr1 1213072 1216096 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00155 10 551 Monolignol Biosynthesis Gene Families AT1G20500 65.209 0.0 736
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00155 K10526 - gmx:100811344 857.825
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00155 01 1213072 1216096 Tsu01g00155 01 1213072 1216096 ECH