Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00149 ATGGAGAGCGAAAAGAAAACTTCGCCAATATCTAACTTTGGAGCATGGGGTATGAACGTTGTCAGCTCCGTTGGAATTATCATGGCTAATAAGCAGCTCATGTCCAACAACGGTTACGCTTTCACATTCGCAACTACGTTGACTGGGTTCCACTTTGCTGTAACTGCTCTGGTGGGTCTGGTGTCAAATGCTACCGGTTATTCTGCTTCAAAGCATGTACCTATGTGGGAGCTTATTTGGTTCTCAGCAGTTGCAAATATATCTATCACAGGGATGAACTTCAGCCTCATGCTCAATTCTGTTGGATTCTACCAAATATCAAAACTAAGCATGATTCCGGTGGTTTGTGTGATGGAGTGGATCCTTCACAGCAAACACTACTCAAGGGAAGTAAAAATGTCAGTCATGGTTGTGGTTATTGGTGTTGGTGTTTGCACTGTAACTGATGTAAATGTTAACCTCAAAGGTTTTGTGTGTGCCAGTCTAGCAGTTGTATCATCATCTTTACAACAAATTTCAATTGGTTCTCTACAAAAGAAATATTCAATTGGGTCTTTTGAACTGCTGAGTAAGACTGCTCCTATTCAAGCTCTCTCTCTCATTATTCTTGGTCCATTTGTTGATTACTATCTCAGTGGCAAGTTGATAACCAACTTTAAGATGTCTTCTGGTGCCATTTTATTCATTCTTCTTTCATGCACCCTGGCTGTGTTTTGCAATGTAAGCCAGTACCTCTGCATTGGGCGCTTCTCAGCAGTTTCCTTCCAGGTTTTAGGCCACATGAAAACATTGTGTGTTCTGACTTTGGGGTGGCTGCTATTTGATTCAGAGCTCACTTTCAAGAACATCATGGGAATGGTTCTTGCAGTTGTCGGCATGGTTATTTATAGTTGGGCTGTGGAGCTTGAAAAGCACTCAAATGTGAAGACTCTTCCTCATGCGAAAAACAGCCtaacagaagaagaaattaggctATTGAAGGAAGGGGTAGAAAATAGTCCGTTGAAGGATATTGAACTTGGTGAGGCTAAAGCTACTACTCAAACTGAAATCATTCATGATGAACCTCAAGTGAGAATATCAGATAGAACTAGAATTCCAACAAGAGGCCTTCAAGACTTTGATGTGATTTCTGACAACTTGATCACTAATGAGGGTGATTTAGTTCACTTGGCATTTCCCGCCCACCAAGAGCAGCATGGGGTCCGAGCAAAATTTCGATTTCCTCAGCATGAAAGGAGAAAGAGATGGGGAGGATGCTTTTCTTGTTTTGGTTCACAGAAAGGTGGGAAGCGCATTGTACCTGCATCCCGAATTCCTGATAATAATGGGTCAGCCAGTCAGCCAAATGGACCCCAAGTGACTGGCTTGACCAATCAAGCCACGGGTCTAGCTCCTTCTCTCCTAGCTCCACCTTCTTCACCTGCATCCTTCACACATTCTGCCATTCCTTCAACTGCGCAATCACCTAGTTGTTTCTTGTCATTATCTGCAAACTCACCTGGCGGTCCTTCATCTACAATGTTTGCAACTGGACCATATGCTCACGAAACACAACTCGTGTCTCCTCCAGTCTTCTCAAATTTTACTACGGAACCATCAACTGCTCCTCTCACTCCTCCCCCTGAGTTGGCTCACATAACAACTCCCTCTTCCCCAGATGTACCTTTTGCTCATTTTCTAACATCTTCAGCAAATCTCAAAAACAATGGCAAGAGTAATTACATCACTGCAAATGATCTTCAAACTACATATTCCCTCTACCCTGGAAGTCCTGCCAGTAGCCTTATATCTCCAATATCAAGAAACAATGGTGACTGTCTATCAACTTCTTTCCCTGAGCGGGAGTTTCGCCCACAGTGGGATTCATCACTGTATCCCGAAAATGGAAAATACCAGAGGACTGGGTCTGGGAGGGTGTCTGGGCATGACACAAATGATGTACCTATGGCATCCCAAGATACAAATTTCTTTTGCCCTGCTACCTATGCACAGTTCTATTTAGACCAAAACCCTCCATTCCCTCATAATGGTGGGAGATTAAGTGTTTCAAAAGATTCAGATGCTCAATCTACAGGTGGAAATGGACATCAGAGTAGATCTTCTAGAAGTCCTAAGCAAGATGTGGAAGAAATAGAAGCTTACCGAGCATCCTTTGGTTTCAGTGCAGATGAGATTATAACCACTAGTCATTATGTGGaaatttctgatgtaatggatgATTCCTTTACCATGATGCCCTTGACCGCTGGCAAATCAATGATGGAAGATAACATAGAGCCTTCATTGATGAAAGGATTCAAAGCTCAGGAGACACAAGTGGGTTTGCAGAATCTAAAATGCCTTCGATTAGACCCGGGTCCAGTTGGCAAGCAAGCAAAGAATCAAGTCCCTATATGTGATGGATATGAAGATCATAAATCATCTGGACATTGTAGCAACAGCTCTGGATTAAGTACACCTGATAATCATACTCTCGTGGATGATGAAGATATATTCTCTAAAATTGGGTCATCGAGAATCTGCAGGAAATATCAGATGGGGTTATCATGCTCTGATGCAGAGTTTGGCTTTAGCAAAGGGCTTAGTGAATCTCCTGCTTTTGTTCTGTTCTTATGCAACCCTACTCTTTACAGTCTTTATACCGTTAACTTATTTCAACAACTTACTATATACAACTTGTGTTGTGTATTggGTCATGCAAAGAAGCATAAACACATTCGGTTCAAAGTGATAGAGATGGATGAAGTAGATGTGGAACCAGAAAGTGAAGGTTTCCCTCAACCTGAAGCTTCCTCAAAAGATAGTCTTCATATTGATTTCCAACAAAATGAAAGTGTTGCGCATAAGGATGACACGTCGCAGGCAGCAGTGAATGATGCCGATGACGATTTTGCCAACTTCCATCATCAACTTGTAGACGTCCTTTCTGTAGAGTGTAGACCCAATCTCGATGATTGTCGACGAACAAGAGAAAATGATTTCGTTGATCATTGA 2997 0.4171 MESEKKTSPISNFGAWGMNVVSSVGIIMANKQLMSNNGYAFTFATTLTGFHFAVTALVGLVSNATGYSASKHVPMWELIWFSAVANISITGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHSKHYSREVKMSVMVVVIGVGVCTVTDVNVNLKGFVCASLAVVSSSLQQISIGSLQKKYSIGSFELLSKTAPIQALSLIILGPFVDYYLSGKLITNFKMSSGAILFILLSCTLAVFCNVSQYLCIGRFSAVSFQVLGHMKTLCVLTLGWLLFDSELTFKNIMGMVLAVVGMVIYSWAVELEKHSNVKTLPHAKNSLTEEEIRLLKEGVENSPLKDIELGEAKATTQTEIIHDEPQVRISDRTRIPTRGLQDFDVISDNLITNEGDLVHLAFPAHQEQHGVRAKFRFPQHERRKRWGGCFSCFGSQKGGKRIVPASRIPDNNGSASQPNGPQVTGLTNQATGLAPSLLAPPSSPASFTHSAIPSTAQSPSCFLSLSANSPGGPSSTMFATGPYAHETQLVSPPVFSNFTTEPSTAPLTPPPELAHITTPSSPDVPFAHFLTSSANLKNNGKSNYITANDLQTTYSLYPGSPASSLISPISRNNGDCLSTSFPEREFRPQWDSSLYPENGKYQRTGSGRVSGHDTNDVPMASQDTNFFCPATYAQFYLDQNPPFPHNGGRLSVSKDSDAQSTGGNGHQSRSSRSPKQDVEEIEAYRASFGFSADEIITTSHYVEISDVMDDSFTMMPLTAGKSMMEDNIEPSLMKGFKAQETQVGLQNLKCLRLDPGPVGKQAKNQVPICDGYEDHKSSGHCSNSSGLSTPDNHTLVDDEDIFSKIGSSRICRKYQMGLSCSDAEFGFSKGLSESPAFVLFLCNPTLYSLYTVNLFQQLTIYNLCCVLGHAKKHKHIRFKVIEMDEVDVEPESEGFPQPEASSKDSLHIDFQQNESVAHKDDTSQAAVNDADDDFANFHHQLVDVLSVECRPNLDDCRRTRENDFVDH 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00149 998 SUPERFAMILY Multidrug resistance efflux transporter EmrE 221 298 - -
Tsu01g00149 998 MobiDBLite consensus disorder prediction 674 709 - -
Tsu01g00149 998 MobiDBLite consensus disorder prediction 626 646 - -
Tsu01g00149 998 PANTHER OS01G0103800 PROTEIN 405 863 - -
Tsu01g00149 998 MobiDBLite consensus disorder prediction 432 459 - -
Tsu01g00149 998 Pfam Triose-phosphate Transporter family 23 297 IPR004853 -
Tsu01g00149 998 MobiDBLite consensus disorder prediction 683 702 - -
Tsu01g00149 998 MobiDBLite consensus disorder prediction 621 646 - -
Tsu01g00149 998 MobiDBLite consensus disorder prediction 440 459 - -
Tsu01g00149 998 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 405 863 IPR040420 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00149 Tsu-Chr1 1145378 1156473 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00149 22 304 Organic Solute Cotransporters AT3G11320 24.830 1.58e-17 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00149 - - mtr:MTR_1g026560 847.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00149 01 1145378 1156473 Tsu01g00149 01 1145378 1156473 ECH