Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00127 ATGGAGAGGCAGAACAaccaaactcacaataacaaaAGGGCAAGATGGGGACTACAAAATGATGGTGACAAGGAATATTTCAATAGTTATAATGATATTGACCTCCACCAAAATTCCATCAAGGATAACGTGTGGACTAAGGCCTATAAAACTGCTATTGAACATCATCAGCAACAAATTGCTGGAAAGATTGTTTTAGATGTTGGATGTGGGACAGGTCTATTATCTATATTATGTGCTCAAGCTGGAGCAAGTAAGGTATATGCTGTTGATGCAAGTGGCATTGCTATGCAGGCTGAAATTGTTGTTGGTGCAAATAATCTTTCTGACATCATCACAGTATTGCATGGACGAGTTGAGGATATTCAACTCAGTGAAAAGGTTGATGTTATAATTTCAAACTGGATGGGATACATGCTTCTACATGAGCGCATGCTTGAAAGTGTTATCGTAGCCAGAGATCGTTGGCTCAAACCTGGAGGTCTAATGCTTCCTTCTTATGCAACGTTATATCTAGCTCCTGTCACAACTAACAAACATCGTGACTGCATAGACTCTTGGCGCAATGTTGAAGGAATCGATATGTCAGCCATAATTCCAATGGCCACAGTTCATGCTTTTAAAGAACCCATTATGGAGACACTTTCAAGTGAAAATGTTTTAGCTGGTCCTTGTATGGTGAAATACATCAATATCAACAGAGTTGCCATTCATGAGATAGAGTCGATATCAACAGAGTTTCGGTTTACTTCTACGAAGAGTGCACCACTGAGTGGCTTTGCATTATGGTTTGATGTGGAGTTCACCGGGAATCTATTATCAGCTTTTCCCATTCGTTGTCGGTTTCCATTTTCAAGTGCTGACGGTATTCCCGCATTTGGTAATCAGAGCCAACGGACAACAAACCTTAATGAAGCACTGGTCATGTCTACTGGGCCTGAAGATCCTGCAACTCACTGGAAACAgACATTGTTATACTGTTGGAatccaaaagaaaatgaaaagggaCAAGTAATCAAAGGAATTTTGTGTTTATCGAAGAATAATTGGTTTCCTCGCTCTCTATATATTCATGTCGAGTATACTTTGGACGGCCGAAAATCATTGGAATATAATGCTGTTATGAAATGA 1131 0.3846 MERQNNQTHNNKRARWGLQNDGDKEYFNSYNDIDLHQNSIKDNVWTKAYKTAIEHHQQQIAGKIVLDVGCGTGLLSILCAQAGASKVYAVDASGIAMQAEIVVGANNLSDIITVLHGRVEDIQLSEKVDVIISNWMGYMLLHERMLESVIVARDRWLKPGGLMLPSYATLYLAPVTTNKHRDCIDSWRNVEGIDMSAIIPMATVHAFKEPIMETLSSENVLAGPCMVKYININRVAIHEIESISTEFRFTSTKSAPLSGFALWFDVEFTGNLLSAFPIRCRFPFSSADGIPAFGNQSQRTTNLNEALVMSTGPEDPATHWKQTLLYCWNPKENEKGQVIKGILCLSKNNWFPRSLYIHVEYTLDGRKSLEYNAVMK 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00127 376 Pfam Ribosomal protein L11 methyltransferase (PrmA) 59 141 - -
Tsu01g00127 376 Gene3D - 167 375 - -
Tsu01g00127 376 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 23 358 IPR025799 GO:0016274|GO:0018216
Tsu01g00127 376 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 4 364 IPR025799 GO:0016274|GO:0018216
Tsu01g00127 376 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 3 4 364 - -
Tsu01g00127 376 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 29 365 IPR029063 -
Tsu01g00127 376 CDD AdoMet_MTases 65 170 - -
Tsu01g00127 376 Gene3D Vaccinia Virus protein VP39 19 165 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00127 Tsu-Chr1 967389 973255 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00127 26 341 C2H2 Transcription Factor Family AT3G12270 31.722 2.96e-49 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00127 K11437 - jre:108993292 395.971