Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00118 ATGGAAGAGATGTTAGGTTCagcttcaacaacaacaacaatcaattCTTCCAATATAGGGTTTCAGCTATTGAAGAAGCATGGTTGGAAAGAAGGGACAGGTCTTGGGATCTCTGAGCAGGGTAGATTAGAACCGGTGGAAACTCGTGTGAAGAATAATAAACGAGGTTTGGGAGCAGATATAGTGAAGAAAAAGGTTGTTAAGCCTGATCATGGTGATTCACCCAAAGCTGACAATAAGCAgGAACAGTTATCTCAAAAGAAAACCAAAGCACTTTCTAAACGGGTGAGAAAGATGCAGGAGCTTGAAAAGAAGATGCAAGAGAAGGAATTTGAGCGCGCTTTCTTTAGAGAGTTCTGGCCTGACAATGTGTGA 375 0.392 MEEMLGSASTTTTINSSNIGFQLLKKHGWKEGTGLGISEQGRLEPVETRVKNNKRGLGADIVKKKVVKPDHGDSPKADNKQEQLSQKKTKALSKRVRKMQELEKKMQEKEFERAFFREFWPDNV 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00118 124 Coils Coil 92 112 - -
Tsu01g00118 124 Pfam G-patch domain 17 59 IPR000467 GO:0003676
Tsu01g00118 124 ProSiteProfiles G-patch domain profile. 16 62 IPR000467 GO:0003676
Tsu01g00118 124 MobiDBLite consensus disorder prediction 46 95 - -
Tsu01g00118 124 PANTHER BAT4 PROTEIN-RELATED 4 124 IPR039146 -
Tsu01g00118 124 SMART G-patch_5 14 60 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00118 Tsu-Chr1 897824 900865 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00118 8 58 C2H2 Transcription Factor Family AT5G26610 50.980 1.14e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00118 - - cam:101497292 202.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00118 01 897824 900865 Tsu01g00118 01 897824 900865 ECH