Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00096 ATGTCTCTCGAAATTGCTGTCAAGGCTGCCGTTGGCGCTCCGACTGTTCTCGGAGATTgTCCATTTTCACAAAGGGCACTCTTAACTTTGGAAGAGAAGAAGATCCCATACAACATCCACCTAATTGATGTCAGTAACAAACCCCAATGGTTTCTTGAAGTCAATCCAGAAGGAAAGGTTCCAGTGGTTAAGTTTGATGATAAATGGGTTCCTGATTCTGATGTTATCGTGGGAATACTTGAAGAGAAATACCCTCAACCCTCCCTCGTTTCTCCTCCTGAATTTGCATCAGTGGGATCAAATATCTTTGGGACTTTCGTGAGCTTTCTGAAGAGCAAGGATTCAAATGATGGAACAGAACAAGCATTGGTTAATGAACTGAATGCTTTGGATGAACATCTTAAGGCTCATGGTCCATTTGTTGCTGGCGAAAAGGTTTCTGCTGTTGATTTGAGTTTGGCACCAAAACTGTACCATCTAGTGGTAGCACTTGACCACTTCAAGAATTGGGCTATTCCTGAGAGTTTGACAAGTGTCCACAACTACATCAAGTTGCTCTTCGCCCGTGATTCATTTGAGAAAACCAAGGCAGCAAAGGAATATGTCATTGCTGGATGGGCACCAAAGGTCAACACATGA 639 0.4304 MSLEIAVKAAVGAPTVLGDCPFSQRALLTLEEKKIPYNIHLIDVSNKPQWFLEVNPEGKVPVVKFDDKWVPDSDVIVGILEEKYPQPSLVSPPEFASVGSNIFGTFVSFLKSKDSNDGTEQALVNELNALDEHLKAHGPFVAGEKVSAVDLSLAPKLYHLVVALDHFKNWAIPESLTSVHNYIKLLFARDSFEKTKAAKEYVIAGWAPKVNT 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00096 212 SFLD Main (cytGST) 19 186 - -
Tsu01g00096 212 Pfam Glutathione S-transferase, C-terminal domain 118 184 - -
Tsu01g00096 212 Gene3D Glutaredoxin 1 89 - -
Tsu01g00096 212 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 88 IPR004045 -
Tsu01g00096 212 Pfam Glutathione S-transferase, N-terminal domain 19 87 IPR004045 -
Tsu01g00096 212 CDD GST_N_family 20 77 - -
Tsu01g00096 212 Gene3D - 90 212 - -
Tsu01g00096 212 SUPERFAMILY Thioredoxin-like 18 87 IPR036249 -
Tsu01g00096 212 CDD GST_C_DHAR 89 209 - -
Tsu01g00096 212 SFLD Glutathione Transferase (cytosolic) 19 186 IPR040079 -
Tsu01g00096 212 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 1 211 - -
Tsu01g00096 212 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 1 211 IPR044627 GO:0033355|GO:0045174|GO:0098869
Tsu01g00096 212 SUPERFAMILY GST C-terminal domain-like 83 210 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00096 Tsu-Chr1 742095 745639 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00096 1 211 Glutathione S-transferase Gene Family AT1G75270 75.943 1.29e-119 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00096 K21888 - gmx:100306061 365.54