Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu01g00086 | atgatTTCAGACACCGACTGTGAGGAACATTCCACCGTGGCCACTACCGCCGGCGGAGAAAAAACCTCCGATAAAGATAACGCCGCACCGCCGGCAGCTCAAAATATTGTGATGTCTTCCAGAGATAACGATCCTCTCTTCAGCGGTGGTGGCATCAGCTTTCTATCTGGAAGTCGAAATGGAAGGATCAGCTATGGTTATTCCAGTATCAAGGGTAAAAGATCTTCAATGGAGGATTTCTTTGAGACCAAAATATCAGAGGTTGATGGTCAGATGGTTGccttttttggtgtttttgatGGCCATGGAGGATCACGGACTGCAGAATAcctgaaaaataatttattcaagaACTTGAGTAGCCATCCCGACTTTATCAAAGACACAAAGACAGCTATTGTTGAAGCATTTAAACAAACAGACGTTGATTACCTCAATGAGGAAAAGGGACATCATAGGGATGCTGGGTCTACTGCAACAACAGCTTTGTTGTTGGGCGACCGAATTCTTGTTGCAAATGTCGGTGATTCTCGAGTAGTTGCATCTAGAGCTGGTTTAGCTGTTCCTTTATCTGTTGATCACAAACCTGATAGATCTGATGAGCGTCAAAGGATTGAACAGGCTGGGGGATTTGTTATCTGGGCAGGAACATGGAGGGTTGGTGGTGTTCTTGCTGTTTCCCGTGCATTTGGAGACAAGCTTCTTAAGCCATATGTTGTTGCTGACCCAGAAATTCAGGAGGAAGAAATTGAAGGCGTGGATTTCATAATAGTTGCAAGTGATGGTCTTTGGAATGTCATATCAAACAAGGAGGCCGTGTCTTTGGTACAAAATATCATTGATGCAGAAGCAGCATCTAAAGAACTTATTAAAGAAGCTTATACTCGAGGAAGCTCAGACAACATCACTTGTGTTGTTGTTCGATTTGATCCATCTTGA | 939 | 0.4196 | MISDTDCEEHSTVATTAGGEKTSDKDNAAPPAAQNIVMSSRDNDPLFSGGGISFLSGSRNGRISYGYSSIKGKRSSMEDFFETKISEVDGQMVAFFGVFDGHGGSRTAEYLKNNLFKNLSSHPDFIKDTKTAIVEAFKQTDVDYLNEEKGHHRDAGSTATTALLLGDRILVANVGDSRVVASRAGLAVPLSVDHKPDRSDERQRIEQAGGFVIWAGTWRVGGVLAVSRAFGDKLLKPYVVADPEIQEEEIEGVDFIIVASDGLWNVISNKEAVSLVQNIIDAEAASKELIKEAYTRGSSDNITCVVVRFDPS | 312 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu01g00086 | 312 | PANTHER | ALPHABET, ISOFORM E-RELATED | 30 | 311 | - | - | |
Tsu01g00086 | 312 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Tsu01g00086 | 312 | CDD | PP2Cc | 63 | 309 | IPR001932 | - | |
Tsu01g00086 | 312 | ProSiteProfiles | PPM-type phosphatase domain profile. | 64 | 309 | IPR001932 | - | |
Tsu01g00086 | 312 | SUPERFAMILY | PP2C-like | 57 | 310 | IPR036457 | - | |
Tsu01g00086 | 312 | Pfam | Protein phosphatase 2C | 65 | 302 | IPR001932 | - | |
Tsu01g00086 | 312 | PANTHER | PROTEIN PHOSPHATASE 2C 11-RELATED | 30 | 311 | - | - | |
Tsu01g00086 | 312 | Gene3D | - | 57 | 312 | IPR036457 | - | |
Tsu01g00086 | 312 | SMART | PP2C_4 | 53 | 307 | IPR001932 | - | |
Tsu01g00086 | 312 | ProSitePatterns | PPM-type phosphatase domain signature. | 95 | 103 | IPR000222 | GO:0043169 | |
Tsu01g00086 | 312 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu01g00086 | Tsu-Chr1 | 672412 | 676167 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu01g00086 | 36 | 312 | PP2C-type Phosphatase Gene Family | AT1G43900 | 73.646 | 1.14e-154 | 436 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu01g00086 | K17506 | - | gmx:100776867 | 523.087 |