Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00069 ATGTCATTCTGGGGAGGTCACCGCGTTGCAACCCTCCGTCGTTGGACGCTGCATACCGTTTTCAACTTCTCCTCTCTCCCCAATGTTTCTTCTCACTCCCCTCTCCTCCACAATTTTTTACCATGGTTGGAGAATAAAGCTTCctccaccatttcttcttctctttccatTGCAAATTCTTCATACGGAAACTCCTTGTTTGCTTCCAACTCAATTCAAACCGGTGATTGCATTTTACAGGTTCCTTACTCTGTGCAATTAACTCCGGACAATCTCCCTCCTCAAATTAGATCTTTGATCAGTGAAGATGTTGGTAATATTGCAAAACTTGCTACTGTTCTTCTAATTCACAAGAATTTGGGTCAGGACTCTGAATGGTATCCTTATATCAGCTGCCTTCCCCCGCAAGCTCAGATGCATAATACGatattttggaATGAGAGTGAGTTGGAGATGATTCGTCAAAGTTCTGTTTATCAGGAAAGTATTTACCAAAAGTCTCAAATCGAAAAGGACTTTATGGCAATCAGACATGTTTTTGAATCAATTGGTCAAAGTTCCGGAGATTTTACCTGCAAGGACTTCATGCACGCATGTGCACAAGTTGGCTCTAGAGCATGGGGAAGCACAAAGGGTTTATCTCTGATTCCCTTTGCAGATTTTTTAAATCATGATGGGATTTCAGAAGCAATTGTAATGAGTGATGACGACAAGCAATGCTCAGAaGTTATCGCTGACCGTGATTATGTTCCTGGCGAACAGgtACTTATAAGATACGGAAAGTTTTCAAATGCTACATTGATGCTGGACTTTGGTTTTACAATTCCATACAACATTTATGATCAGGTTCAGATCCAGTGTGATATACCTAAGCAAGATCCTCTGTGGGACATGAAATTAGAACTCTTGCAGCAATACTTTGTACCTCCAACCAAAGAGGCGAAGGGCTTGAAGTATTCTGTGAATTCCTTCACAATCAAGTTTGCACTTACtcctaattttatatttttctttgctgAATAA 1023 0.3851 MSFWGGHRVATLRRWTLHTVFNFSSLPNVSSHSPLLHNFLPWLENKASSTISSSLSIANSSYGNSLFASNSIQTGDCILQVPYSVQLTPDNLPPQIRSLISEDVGNIAKLATVLLIHKNLGQDSEWYPYISCLPPQAQMHNTIFWNESELEMIRQSSVYQESIYQKSQIEKDFMAIRHVFESIGQSSGDFTCKDFMHACAQVGSRAWGSTKGLSLIPFADFLNHDGISEAIVMSDDDKQCSEVIADRDYVPGEQVLIRYGKFSNATLMLDFGFTIPYNIYDQVQIQCDIPKQDPLWDMKLELLQQYFVPPTKEAKGLKYSVNSFTIKFALTPNFIFFFAE 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00069 340 Gene3D - 276 333 IPR036464 -
Tsu01g00069 340 Pfam SET domain 65 260 IPR001214 GO:0005515
Tsu01g00069 340 SUPERFAMILY SET domain 34 278 IPR046341 -
Tsu01g00069 340 Gene3D set domain protein methyltransferase, domain 1 33 273 - -
Tsu01g00069 340 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 34 323 - -
Tsu01g00069 340 PANTHER OS01G0976450 PROTEIN 34 323 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Tsu01g00069 SET 9.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00069 K19199 - gmx:100818002 472.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00069 01 512468 518296 Tsu01g00069 01 512468 518296 ECH