Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00065 ATGTCGAGTTTGGCGAAAAGTGTGTCTGAAGCTGTCCCTATTTATCCAATGATGACGGGAGTCATTCCAAATTCTGTTTTGGAAAATATTCAGCAGATACATAGAAAGTTTATTTGGGGTGAATATGATAATGTGAGAAAACACCATGCTATTGGGTGGGAGACTATAACTAAACCCAAATCGCTGGGTGGTCTCGGATTAAGGAGATTGGATAAAATGAATAAGGCTTGTATTCTAAAGCTTAGCTGGAAATTGCAAGGTGGCGGCTCTCAAGAATTCTGGTGTGAGGTGTTGAGGGGGAAGTACAGGAGAGTAATCGATATTAATGGTGTGCAAACTTGGGGAACAGATTCTTCTTTATGGAAGAATATGGTTAAACTTGGGCCAACTCTTGAGAAGAATTGTTTATGGAGTGTGAGAAATGGTAGAATTGTGGACTTTCGCAAACACGCTTGGATTGATGACAAACTGAAGCTATCGGATTTGCAGCTTGCAATACCAAAAGAGACGAAGCATGTTAAGGTAGTGGAGCTGTTAGATGATAGAGGGGCATGGAATTGGAGTTTAATACAATACTGGGTTCCAGACCACATCATGCATAAAATAGCAGCGATTTTACCTCCGGAAGACACAGCTGGAGTTGATCAAGTCTCGGCCGTTAATCTGCTCGCCGACACTCACACCGACGAAGTGGTTCTCAAACTTCTCCTTACTCCGACCAATGGTGACGTCCAAAATAACGTCCAAGAACCAGAACAAAACGCCGACGACAACGTGGTTTCATACGGGAAGGTGTTGACACAATCTCATTGCTATAGTTCTACCTTTATTCCCATTTCCTGTGCAACCTTGATTCTACCTCATCTTGATACTCAAGATCCTAAGGCATGCCAACTATTACCAGCACATGTTGTCCACGGCAATGTATGGAACATAAACCACACACGCTCGGCTAATAGGCATTTGTTTACAATGGGTGGGCAAAATTCGTGA 993 0.428 MSSLAKSVSEAVPIYPMMTGVIPNSVLENIQQIHRKFIWGEYDNVRKHHAIGWETITKPKSLGGLGLRRLDKMNKACILKLSWKLQGGGSQEFWCEVLRGKYRRVIDINGVQTWGTDSSLWKNMVKLGPTLEKNCLWSVRNGRIVDFRKHAWIDDKLKLSDLQLAIPKETKHVKVVELLDDRGAWNWSLIQYWVPDHIMHKIAAILPPEDTAGVDQVSAVNLLADTHTDEVVLKLLLTPTNGDVQNNVQEPEQNADDNVVSYGKVLTQSHCYSSTFIPISCATLILPHLDTQDPKACQLLPAHVVHGNVWNINHTRSANRHLFTMGGQNS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00065 330 Gene3D - 259 329 IPR015300 -
Tsu01g00065 330 PANTHER REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED 4 177 - -
Tsu01g00065 330 SUPERFAMILY DNA-binding pseudobarrel domain 257 324 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00065 Tsu-Chr1 481578 484131 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00065 188 326 B3 DNA Binding Superfamily AT2G28350 30.000 2.85e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00065 - - pop:112325720 140.969