Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00042 ATGTCTGGAGCTGAAGAACTCTGGGAGCGGCTAGTTCGGGCTGCTCTGAGAAGGGAGAGAACCGGTGATGATGCATATGGGCGACCTGCCGGTGGAATTGCTGGAAATGTTCCATCCGCTCTTGCTAAAAATAGAGATATTGATGAAATTTTAAGAGTTGCAGATGAAATTCAAGACGATGATCCCACGGTTTCTCGAATATTATGTGAGCATGCCTATTCATTATCTCAAAATTTGGACCCCAATAGTGAAGGCCGGGGTGTTTTACAATTCAAGACTGGTTTGATGTCTGTCATTAAGCAAAAGCTGGCTAAAAGGGAAGTTGGAACCATAGATAGAAGTCAGGACATAGCCCGATTACAAGAGTTCTACAAGAGTTATAGAAAGAAGAATAATGTGGATAAATTACGTGAGGAGGAAATGCAGTTGAGGGAATCTGGTGCTTTCAGCCGGAATCTTGGCGAGTTGGAGCGTAAGACTGTGAAGAGGAAAAGGGTTTTTGCTACCTTAAAGGTTTTAGGAACAGTGCTTGAGCAATTGACTGAAGAAATTCCTGATGAGCTTAAACGGGTCATGGAATCAGATTCTGCATCGACAGAGGATCTGATTGCTTACAACATTATTCCTATAGATGCTGCTTCTTCGACAAATGCTATTGTTTTTTTCCCCGAGGTGCAAGCGGCGGTTTCAGCTTTGAATTATTTCAATGGCTTGCCTGAACTGCCTAGGGCCTATTTCATTTCTCCGACAAGGAATGCCAACATGTTAGATTTTCTGCAGTATACTTTTGGATTTCAGAAAGATAATGTAGCTAATCAGCGTGAACACATAGTTCATCTGCTTGCAAATGCGCAATCTCGGCTTGGAGTTCCAGACAAAACCGAACCCaaattggatgaagcagcCTTGCAAAAAGTATTCCTCAAATCCCTCGAGAATTACATAAATTGGTGCAACTACCTATGCATTACACCTGTTTGGAGCAGTTTGGAGGCTGTTAGTAAAGAGAAGAAGTTGCTGTATGTTTCTTTATACCTACTAATATGGGGTGAAGCGTCAAATGTCAGGTTTCTACCAGAATGCCTGTGCTACATATTCCATCATATGGCTAGAGAGATGGATGAGATCTTAAGGCAACAGATTGCAGAGACGGCTAATAGTTGCACTTCTGAGAATGGTGTCTCATTTCTTGATCATGTCATCTTTCCTCTCTATGACGTTATTTCTGCAGAAGCTACAAGCAATGATAATGGGAAGGCGCCTCATTCATCCTGGAGAAATTACGATGATTTTAATGAGTATTTCTGGTCACTACATTGCTTTGAGCTTAGCTGGCCATGGCGTATAAGTTCTTCATTTTTCCAAAAGCCGCATCCCAGATCAAAGAAAATGTTATCTGGCAGAAGTCAACGTCAGGGGAAAACATCTTTTGTGGAGCATCGGActttttttcatctttatcaTAGTTTCCATCGATTGTGGATATTTCTTTTCATGATGTTCCAGGGTCTAGCAATTATTGCTTTCAATGATGGAAAATTTAATGCCAAGACCTTGCGAGAGGTTCTTAGTCTTGGACCTACATTTGTTGtgatgaaattttttgagaGTGTCCTGGACATTTTTATGATGTACGGTGCATATACAACTACCAGGCGCTCAGCTCTATCACGAATTTTTCTAAGATTTCTTTGGTTTAGCCTTGCTTCAGTTTTTGTAACTTTCCTTTATGTAAAAGCACTCCAGGAAGAGAGTAAAAGCGATTCAAATTCAGTTATTTTCAGATTTTATGTTATTGTTGTCGGGATTTATGCCGGTGTCCAGTTTTTCATTAGTTTCCTCATGCGGATTCCTGCATGTCATCTTCTGACAAACCAATGTGATCGTTGGCCTCTCATTCGTTTTGTGAAGTGGCTGCGCCAGGAACGCCATTATGTTGGTCGGGGAATGTATGAAAGGAGTTTGGATTTCATAAAGTATATGCTGTTTTGGCTTGTCATTTTGAGtgcaaaattttcatttgcttACTTTCTTCAGATCAAGCCACTTGTGAAACCAACGAGGGAcataataaaagagaaaaatttagtTTACTCTTGGCATGATTTTGTCTCTAAAAATAATCACAATGCTCTGACAATTGTTAGCATATGGTCTCCAGTGATTTGTATTTATCTTTTGGACATATATGTGTTTTACACACTTGTATCCGCTGTCTGGGGATTCTTGCTCGGAGCAAGAGCTCGTCTGGGAGAAATAAGGTCACTGGAAGCGCTGCAAAAACTTTTTGAGCAGTTTCCTGGAGCTTTCATGGACAATCTTCATGTTGCTCTACCCAACAGGAGTGCCCAACTGTCATCTGTTCAGGTTGTTGAAAAGAACAAGGTTGATGCTACTCGGTTCTCCCCGTTTTGGAATGAGATTATAAGAAATCTAAGGGAGGAAGACTATATAACCAACTTTGAATTGGAGTTGCTTTTAATGCCTAGAAATTCTGGAGATATTCCTCTGGTTCAGTGGCCACTCTTTCTACTTGCAAGCAAGATATTTTTGGCTAGGGATATTGTTGTTGAGAGTAAAGATACTCAAGATGAGCTTTGGGATAGGATTTCACGCGATGACTATATGATGTATGCAGTTCAGGAGTGTTACTATGcaattaaactcattttaaCAGAAGTATTAGATGATGCAGGAAGGATGTGGGTTGAAAGGGTATATGATGATATCAATGCTAGTATCACAAAAAGGAGTATTCATGTGGACTTTCGACTAAATAAGTTGGCTGTTGTGATATCTAGAATAACTGCATTGATGGGGATTCTGAAAGAGACTGAAACACCTGAGCTTGAAAAAGGTGCAGTTAGGGCTGTTCAGGATCTCTATGATGTTATACGACATGATGTCCTTTCTATGAATATGAGgGATAATTATGACACGTGGAGTTTACTGACTAAAGCTAGAGATGAAGGGCATTTGTTTCAAAAGTTGAAATGGCCAAATGCAGACTTAAGAATGCAAGTCAAAAGATTATATTCATTGCTGACTATCAAAGACTCTGCGTCAAGCGTACCTAGAAATCTTGAGGCTAGGCGAAGGCTGGAGTTTTTTGCAAATTCACTCTTTATGAAGATGCCTCGTGCAAAGCCAGTTCGACAAATGTTATCTTTTagTGTTTTCACCCCTTACTATTCTGAGATTGTGCTTTATAGCATGGCTGAActccaaaagaaaaatgaagacggaatttcaattttgttctaCCTTCAGAAGATATTTCCAGATGAGTGGAAAAACTTTCTTGCCCGGATCGGCCGTGATGAAAATGCAAGTGACACTGATCTTTTCGATAGTCCTAGTGATATTCTTGAATTGCGTTTTTGGGCTTCTTATCGGGGGCAAACATTGGCCAGAACTGTTCGGGGGATGATGTATTATAGGAAGGCTCTCATGCTTCAGACCTATTTGGAGAGGACTACTGCTGGTGGAGATTTGGAGGCTGGACTTGGTTTTGATGAAGTATCTGATACACGTGGCTTTGATTTATCCCCTGAAGCCCGTGCTCAGGCAGATCTGAAATTCACTTATGTTGTGACATGCCAAATATATGGTAAGCAGAAAGAGGAACAAAAGCCTGAGGCTGTTGATATTGCTTTACTTATGCAAAGAAATGAAGCTCTTCGTGTTGCTTTCATTGACGTTGTCGAAACTTTAAGAGATGGACTAGTGAACACAGAATACTACTCAAAGCTTGTGAAAGCTGATATTAATGGGAAAGACAAGGAAATATACTCGGTGAAATTACCTGGAAATCCCAAACTTGGTGAAGGGAAGCCCGAGAATCAAAATCATGCAATTATATTTACTCGTGGGAATGCAGTTCAAACAATTGACATGAATCAGGATAACTATTTTGAGGAGGCTTTGAAGATGAGGAATCTTCTTGAGGAATTTCATTCTGATCATGGTCTTCGTGCTCCTACCATACTTGGTGTTAGAGAGCATGTCTTTACTGGAAGTGTGTCATCTTTGGCTTCATTCATGTCCAATCAAGAAACAAGTTTTGTGACTTTGGGTCAGCGGGTTTTAGCAAATCCTTTGAAGGTTCGTATGCATTATGGTCATCCTGATGTTTTTGATAGAGTGTTCCACATAACCCGTGGTGGTATCAGCAAGGCTTCCCGTGTTATCAATATTAGTGAAGATATCTACTCAGGATTCAATTCAACCTTGCGTCAAGGAAACATTACTCATCATGAATATATTCAGGTTGGTAAGGGAAGAGATGTTGGCCTCAATCAGATTGCACTATTTGAGGGGAAAGTTTCAAGTGGCAATGGTGAACAAGTTCTGAGTCGGGATATATACAGACTTGGGCAACTTTTTGATTTCTTCAGGATGATGTCTTTTTACTTCACAACAGTTGGATACTACTTTTGTACCATGTTAACGGTGCTGACAGTTTATGCGTTTCTTTATGGAAAAACTTATTTGGCACTCTCTGGTGTTGGTGAAACAATTGAAGAAAGGGCTAAAATAACCAAGAACACTGCTCTGAGTGCTGCTTTGAATACACAGTTTCTCTTCCAAATTGGTATCTTCACTGCTGTGCCAATGGTCTTGGGCTTCATTCTTGAACAAGGCTTCTTGAGGGCCGTTGTCAATTTTATCACGATGCAGTTTCAGCTCTGCACtgtttttttcactttttctttgGGTACAAGAACCCATTATTTTGGAAGGACAATTCTTCATGGCGGTGCAAGGTATCAAGCGACTGGTCGAGGGTTTGTCGTCCGCCATATCAAATTTTCTGAAAATTACAGACTCTACTCTCGTAGCCATTTTGTTAAAGGATTGGAAGTTGTGCTTCTGTTGATAGTATATCTTGCATATGGTTATAATGATGGTGGTGCACTGGGATACATTCTTTTGAGTGTAAGCAGTTGGTTTATGGCTCTATCCTGGTTGTTTGCTCCATATTTATTCAACCCTTCTGGATTTGAGTGGCAAAAGGTAGTGGTAGACTTCCGAGACTGGACAAATTGGCTACTTTACAGAGGTGGAATTGGTGTTAAGGGAGAAGAAAGCTGGGAAGCTTGGTGGGAAGAAGAACTGGCTCATATCAGGAGCTTCGGTTCAAGGATAGCAGAGACCATCCTGAGTctgagatttttcatttttcaatatgGTATTGTGTACAAGCTTGACGTTCAAGGAACAAATACTTCATTGACGGTGTATGGATTCTCATGGTTAGTGCTGGCAGTGCTAATAATTCTTTTTAAGGTATTCACCTTTAGCCAGAAGATATCAGTCAATTTCCAGCTTCTGCTGCGCTTTGTACAAGGACTATCACTCTTGTTTGCACTGGCTGGCTTGGTAGTAGCAGTTATATTAACCGACCTATCGGTTCCAGACATATTTGCTTCTATTTTAGCATTCATTCCTACTGGGTGGGGAATTTTATCGATTGCTGCTGCTTGGAAACCTGTGGTGAAAAGACTAGGACTATGGAAGTTCATCCGGTCAATTGCACGCCTATATGATGCTGGCATGGGAATGCTCATCTTTGTGCCCATTGCATTCTTTTCATGGTTTCCATTTGTATCAACATTCCAAACTCGCCTCATGTTTAACCAGGCTTTTAGCCGAGGGTTAGAAATTTCTTTGATCCTTGCTGGGAACAATCCCAATACTGGGATATAG 5709 0.3959 MSGAEELWERLVRAALRRERTGDDAYGRPAGGIAGNVPSALAKNRDIDEILRVADEIQDDDPTVSRILCEHAYSLSQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREVGTIDRSQDIARLQEFYKSYRKKNNVDKLREEEMQLRESGAFSRNLGELERKTVKRKRVFATLKVLGTVLEQLTEEIPDELKRVMESDSASTEDLIAYNIIPIDAASSTNAIVFFPEVQAAVSALNYFNGLPELPRAYFISPTRNANMLDFLQYTFGFQKDNVANQREHIVHLLANAQSRLGVPDKTEPKLDEAALQKVFLKSLENYINWCNYLCITPVWSSLEAVSKEKKLLYVSLYLLIWGEASNVRFLPECLCYIFHHMAREMDEILRQQIAETANSCTSENGVSFLDHVIFPLYDVISAEATSNDNGKAPHSSWRNYDDFNEYFWSLHCFELSWPWRISSSFFQKPHPRSKKMLSGRSQRQGKTSFVEHRTFFHLYHSFHRLWIFLFMMFQGLAIIAFNDGKFNAKTLREVLSLGPTFVVMKFFESVLDIFMMYGAYTTTRRSALSRIFLRFLWFSLASVFVTFLYVKALQEESKSDSNSVIFRFYVIVVGIYAGVQFFISFLMRIPACHLLTNQCDRWPLIRFVKWLRQERHYVGRGMYERSLDFIKYMLFWLVILSAKFSFAYFLQIKPLVKPTRDIIKEKNLVYSWHDFVSKNNHNALTIVSIWSPVICIYLLDIYVFYTLVSAVWGFLLGARARLGEIRSLEALQKLFEQFPGAFMDNLHVALPNRSAQLSSVQVVEKNKVDATRFSPFWNEIIRNLREEDYITNFELELLLMPRNSGDIPLVQWPLFLLASKIFLARDIVVESKDTQDELWDRISRDDYMMYAVQECYYAIKLILTEVLDDAGRMWVERVYDDINASITKRSIHVDFRLNKLAVVISRITALMGILKETETPELEKGAVRAVQDLYDVIRHDVLSMNMRDNYDTWSLLTKARDEGHLFQKLKWPNADLRMQVKRLYSLLTIKDSASSVPRNLEARRRLEFFANSLFMKMPRAKPVRQMLSFSVFTPYYSEIVLYSMAELQKKNEDGISILFYLQKIFPDEWKNFLARIGRDENASDTDLFDSPSDILELRFWASYRGQTLARTVRGMMYYRKALMLQTYLERTTAGGDLEAGLGFDEVSDTRGFDLSPEARAQADLKFTYVVTCQIYGKQKEEQKPEAVDIALLMQRNEALRVAFIDVVETLRDGLVNTEYYSKLVKADINGKDKEIYSVKLPGNPKLGEGKPENQNHAIIFTRGNAVQTIDMNQDNYFEEALKMRNLLEEFHSDHGLRAPTILGVREHVFTGSVSSLASFMSNQETSFVTLGQRVLANPLKVRMHYGHPDVFDRVFHITRGGISKASRVINISEDIYSGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVSSGNGEQVLSRDIYRLGQLFDFFRMMSFYFTTVGYYFCTMLTVLTVYAFLYGKTYLALSGVGETIEERAKITKNTALSAALNTQFLFQIGIFTAVPMVLGFILEQGFLRAVVNFITMQFQLCTVFFTFSLGTRTHYFGRTILHGGARYQATGRGFVVRHIKFSENYRLYSRSHFVKGLEVVLLLIVYLAYGYNDGGALGYILLSVSSWFMALSWLFAPYLFNPSGFEWQKVVVDFRDWTNWLLYRGGIGVKGEESWEAWWEEELAHIRSFGSRIAETILSLRFFIFQYGIVYKLDVQGTNTSLTVYGFSWLVLAVLIILFKVFTFSQKISVNFQLLLRFVQGLSLLFALAGLVVAVILTDLSVPDIFASILAFIPTGWGILSIAAAWKPVVKRLGLWKFIRSIARLYDAGMGMLIFVPIAFFSWFPFVSTFQTRLMFNQAFSRGLEISLILAGNNPNTGI 1902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00042 1902 Pfam 1,3-beta-glucan synthase component 1024 1715 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Tsu01g00042 1902 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1 1900 - -
Tsu01g00042 1902 SMART FKS1_dom1_2 336 448 IPR026899 -
Tsu01g00042 1902 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 338 445 IPR026899 -
Tsu01g00042 1902 PANTHER BNAC03G35120D PROTEIN 1 1900 - -
Tsu01g00042 1902 Gene3D - 34 193 IPR023175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00042 Tsu-Chr1 298696 334016 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00042 1 1902 Cell Wall Biosynthesis AT3G07160 76.190 0.0 3029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00042 K11000 - gmx:100787540 3437.89