Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00036 ATGGTCTCAAGATTGaagaatgaaaattttgttgagTTGCATGGATACTGTGTTGAAGGAAATCTTCGTGTACTTGCATACGAGTTTGCTACTATGGGCTCTCTTCATGACATTTTGCACGGTAGAAAGGGAGTTCAAGGGGCACAACCAGGGCCAACTCTTAACTGGATGCAGCGAGTTAGAATTGCAGTTGATGCAGCAAGGGGATTAGAATATTTACATGAGAAAGTTCAACCATCAATTATACATAGGGATATCAGGTCAAGCAATGTGCTTATCTTTGAAGATTACAGAGCTAAGGTAGCTGATTTTAACCTCTCTAATCAGGCCCCTGACATGGCTGCACGCCTTCATTCTACCCGTGTATTGGGAACCTTTGGGTATCATGCTCCAGAATATGCCATGACTGGGCAGTTGACTCAAAAAAGTGATGTCTACAGTTTTGGCGTTGTTCTTCTTGAACTTCTTACAGGTAGGAAACCCGTTGATCATACCATGCCTCGAGGACAACAAAGTCTTGTCACATGGGCTACCCCAAGGTTAAGTGAAGATAAAGTGAAACAATGTGTGGACCCAAAACTGAGAGGAGAATATCCCCCAAAAGGAGTTGCTAagCTTGCAGCTGTAGCAGCACTGTGTGTGCAGTATGAAGCTGAGTTTAGGCCTAATATGAGCATTGTTGTTAAAGCACTCCAACCACTTCTGAAGGCTCCCGCCCCTGCACCAGAAACTTGA 735 0.4313 MVSRLKNENFVELHGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPTLNWMQRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLIFEDYRAKVADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLRGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKAPAPAPET 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00036 244 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 2 238 - -
Tsu01g00036 244 Pfam Protein tyrosine and serine/threonine kinase 2 231 IPR001245 GO:0004672|GO:0006468
Tsu01g00036 244 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 3 2 238 - -
Tsu01g00036 244 SUPERFAMILY Protein kinase-like (PK-like) 2 234 IPR011009 -
Tsu01g00036 244 PIRSF ILK 1 239 - -
Tsu01g00036 244 Gene3D Transferase(Phosphotransferase) domain 1 31 239 - -
Tsu01g00036 244 SMART tyrkin_6 1 231 IPR020635 GO:0004713|GO:0006468
Tsu01g00036 244 ProSiteProfiles Protein kinase domain profile. 1 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g00036 244 ProSitePatterns Tyrosine protein kinases specific active-site signature. 81 93 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00036 Tsu-Chr1 260595 265360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00036 1 236 Receptor kinase-like Gene Family AT3G58690 51.899 5.99e-78 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Tsu01g00036 PK_Tyr_Ser-Thr 1.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00036 K13436 - gmx:100790016 435.261