Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00027 ATGGAATATTACGGGGTTGTGAGTTTGATATTAGCCGTTTTGGTATGGATGTGGTTGGCAATGGTGATGGAACATAAAAGATCCAAACTTGGTCATCAACTTCCACCTGGACCAAGATGTTGGCCAGTGGTTGGCAACATTTTCCATATAGGTTTGTCACCTCCACACGAGTCTTTTACAATACTTGCTCGAAAACATGGTCCTATCATGACTCTTTGGCTAGGTTCCATGTGCACCGTCGTTGTTTCCTCGAGTGAAGTAGCCTGTGACATGTTCAAAAACAACGATGTTGCTCTTGCTGGAAGGAAGATTTATGAGGCCATGAAAGGGAATCATGAGCATGGTAGTGAAGGTTCACTCATAACTTCTCAATACAATGCACACTGGCGCATGCTGAAGCGCTTGAGCACCACCGAGTTCTTTGTCACAAGTCGCTTAGATGCTATGCGAGGTGTGCGTGCAAAATGCATAGACCGCATGGTTCACTTGATAGACGAAGCTGCTTGTGAGTCTGGGAATGGTGTTGTTGATGTTGGCAAGTTCTTTTTCTTGATGGCTTTTAATCTCATTGGGAACCTTATATTTTCAAAGGACTTGTTAGACCCTGAAATGGAGAGAGGAGCTAGATTCTATCATCATGCGGTTAAGGTTATGGAATATGCTGGGAAACCCAACGTTGCAGATTTCTTTCCTATATTGAAGAGGTTTGACCTGCAAAGAATAAGGAGAAACACACAATTTCACGTTGAAAGAGCCTTTGAGATAGCAGGTTGGTTCATCAAACAAAGGATGGAAAATGATATTGTTTGTGGTGGAAGTGAAAACAATAAAGACTTTTTGGATGTACTCTTGCAATTTCGTGGCGACAGTGTCGGCGGACCCTACAGTTTTACTTCAAGGACTATTAACGTTGTTGTCTTTGAAATGTTCACTGCAGGGACAGACACAACGACAAGCACACTAGAATGGGCGATGGCAGAACTTCTACACAACCCAAGAACGCTAAAGAAAGTGCAAATGGAACTAAGGAGCAAAATAGGCGCAGATAggaaatttgaagaaaatgacaTAGAAAATCTTCCCTACCTCAAAGCAGTTATCAAGGAGACGTTGAGACTTCACCCACCTCTTCCTTTTTTGGTTCCTCACATGGCCATGGACTCTTGCAAGATTGGAGACTACTACATTCCCaaagaaacacaaattttagTGAATGTTTGGGCAATTGGGAGGGACCCAAAAGTGTGGGATGCTCCTTTATTGTTCTGGCCAGAAAGGTTTATGGAGCCAAACATGGTAGATTACAAGGGTCACCATTTTGAGTTTATACCTTTTGGTTCAGGCCGAAGAATGTGCCCAGCAATGCCTCTTGCCTCGCGTGTGCTTCCACTGGCACTAGGCTCCCTCCTCAGCTACTTTGATTGGATTTTGCCCGATGGCTTGAAGCCAGAGAATATGGACATGACAGAGGGAATGGGAATAACATTGAGAAAAGCTGTTCCTTTGAAAGCCATACCTGTGCCTTACAAAGGAACCCCTGTTGATGTTGCAGGGAATCAATAA 1563 0.4287 MEYYGVVSLILAVLVWMWLAMVMEHKRSKLGHQLPPGPRCWPVVGNIFHIGLSPPHESFTILARKHGPIMTLWLGSMCTVVVSSSEVACDMFKNNDVALAGRKIYEAMKGNHEHGSEGSLITSQYNAHWRMLKRLSTTEFFVTSRLDAMRGVRAKCIDRMVHLIDEAACESGNGVVDVGKFFFLMAFNLIGNLIFSKDLLDPEMERGARFYHHAVKVMEYAGKPNVADFFPILKRFDLQRIRRNTQFHVERAFEIAGWFIKQRMENDIVCGGSENNKDFLDVLLQFRGDSVGGPYSFTSRTINVVVFEMFTAGTDTTTSTLEWAMAELLHNPRTLKKVQMELRSKIGADRKFEENDIENLPYLKAVIKETLRLHPPLPFLVPHMAMDSCKIGDYYIPKETQILVNVWAIGRDPKVWDAPLLFWPERFMEPNMVDYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLSYFDWILPDGLKPENMDMTEGMGITLRKAVPLKAIPVPYKGTPVDVAGNQ 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00027 520 PANTHER CYTOCHROME P450 FAMILY 1 4 512 - -
Tsu01g00027 520 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00027 520 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00027 520 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00027 520 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00027 520 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00027 520 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00027 520 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00027 520 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00027 520 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00027 520 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00027 520 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00027 520 PANTHER CYTOCHROME P450 76A1-LIKE 4 512 - -
Tsu01g00027 520 SUPERFAMILY Cytochrome P450 35 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00027 520 Pfam Cytochrome P450 35 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00027 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Tsu01g00027 520 Gene3D Cytochrome P450 27 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00027 Tsu-Chr1 208751 210581 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00027 6 512 Cytochrome P450 AT3G52970 61.333 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00027 - - gmx:100778988 792.727