Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00026 atgtcttgCAAAGCCAACTACAACAACGacgaaattgaagaagaagcgTTTCATCGCGTCAAGAGAGAACGCCTCAATGCCAATCATAACGCACCGGAGGAGGACCAAAATTCTTCTAGCCGCAGAATCATCCGTTCCGAGTTTCTCAAACTCAAATCTCTCATCAACGAGAAAAAAGATGATTTGATGAACACTGATTCTAACAAGTTCGATTCAATCCTTCACGAGTTCGACAAATTACATGACCAAGTCAAGAGACCTCGTGAGCAAGTTGCTGACGCTGAAGCACTTCTCGATCTCACACGCACTTTACTTGGATCCGTTAAATCTCTTGTCAACGAAGGTGTTACTCCTTCTCAGTTTGTTTCATCTCTTCTCAAACACTATGCTCACCCACCCAACACTTCTATCAACTGGCAAAAACTCGGCATTGCTGTTTCCCCTATTTTCCTCACGGCTCATGTCCCTTCTACCATGCTTGGTCCCATGGAAAATCAGTTGAAACAGCGCAAAGCGATCGTGCCTAGAAAGCGAGCTCCTCGTGCAACTACAACTGCTAGGCCTGAACAGTTGGATGATGCTGTTGGTGGCGATAAAACAGATACTGACAAAAACATGTCAATCATGTTTAACATATTaagggaaaagaaaaaggttcAACTTGAACACCTGATTTTGAACAGATTTTCATTTGCCCAGACAGTGGAAAACTTGTTTGCCCTCTCATTTTTAGTGAAAGATGGCCGTGCTGAGattgttatggataaaaaccgTTTGCACTATGTTTCACCCAGAAATGCTCCAGCTGCCAACTCTGTAATGTCAAAAGAAGTTTCTTACACTCATTTTGTCTTCAGATATGATTTCAATGACTGGAAGATAATGAAGGATATTGTAGCTGAAGGTGATGAGTTAATGCCACATAGGATTCAATCTAGCGACATGGTTGACTCACATGCAGAGACAAGTAGTGACAATTGTCAGCCCGCTGCCGTGACTCCTATTCGGAAGATATCCCGAAATAGGGGGCGGGTTCTGCAGGAAGAAGTTGTTGTGGAAGAATCGCCCGAAGATGAAAGTGAAAATGCTTCTAGAGCTGCTGCGATCAGAAGGTGTAAGCGTAAACTTCCTTAA 1134 0.4101 MSCKANYNNDEIEEEAFHRVKRERLNANHNAPEEDQNSSSRRIIRSEFLKLKSLINEKKDDLMNTDSNKFDSILHEFDKLHDQVKRPREQVADAEALLDLTRTLLGSVKSLVNEGVTPSQFVSSLLKHYAHPPNTSINWQKLGIAVSPIFLTAHVPSTMLGPMENQLKQRKAIVPRKRAPRATTTARPEQLDDAVGGDKTDTDKNMSIMFNILREKKKVQLEHLILNRFSFAQTVENLFALSFLVKDGRAEIVMDKNRLHYVSPRNAPAANSVMSKEVSYTHFVFRYDFNDWKIMKDIVAEGDELMPHRIQSSDMVDSHAETSSDNCQPAAVTPIRKISRNRGRVLQEEVVVEESPEDESENASRAAAIRRCKRKLP 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00026 377 MobiDBLite consensus disorder prediction 174 198 - -
Tsu01g00026 377 Pfam Nse4 C-terminal 219 300 IPR014854 -
Tsu01g00026 377 MobiDBLite consensus disorder prediction 351 377 - -
Tsu01g00026 377 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 16 376 - -
Tsu01g00026 377 PANTHER UNCHARACTERIZED 16 376 IPR027786 GO:0005634|GO:0006281|GO:0030915
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00026 Tsu-Chr1 205798 207989 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00026 39 376 Non-SMC Element family AT1G51130 52.857 3.40e-120 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00026 K22825 - gmx:100817716 467.233