Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00005 ATGGGTTGTTTTTCGTGTTTCGATTCCAAGGAGGATGAAAAGCTGAATCCAAATCCtcaacagcagcagcagcagcaagaAACCCATCATCAACAACACGATCATCATGTTTCCAGATTGCCCTCTGCAGCCTCTGCAGGAGCAGACAAACTGCGGTCAACAAGTAATGGAGGAGCATTCAAAAGGGAATTGACTGCTGCTCTCAAAGAAGGACCGCCTGGCCAAATTGCCGCTCAAACTTTTACTTTCCGTGAACTTGCCGCTGCAACAAAAAATTTCAGGCCTCAGTCCTTTTTAGGGGAAGGTGGTTTCGGAAGGGTCTACAAGGGACGCCTGGAATCTACGGGTCAgGCTGTTGCTGTTAAGCAGTTAGACAGAAACGGTCTCCAGGGTAATCGGGAGTTCCTTGTGGAGGTTCTCATGCTCAGTCTTCTACACCACCCTAACCTTGTCAGTCTCATTGGATACTGTGCGGACGGGGACCAACGCCTCCTAGTTTATGAATTTATGCCGTTGGGATCATTGGAAGACCACCTTCACGATCTCCCCCCTGATAAGGAGCCATTAGATTGGAACACTAGAATGAAAATAGCTGCCGGTGCTGCAAAAGGATTGGAATACCTACATGACAAGGCCAATCCTCCGGTAATTTATAGGGACTTCAAGTCATCTAATATATTACTTGATGAAGGTTATCACCCAAAGCTTTCTGACTTTGGTCTGGCGAAGCTTGGTCCTGTTGGGGACAAATCACATGTTTCCACTCGTGTCATGGGAACTTATGGTTACTGTGCTCCTGAGTATGCTATGACTGGACAACTGACTGTAAAATCTGATGTATATAGTTTTGGGGTAGTCTTCTTGGAGCTGATTACTGGCCGTAAAGCCATTGACAGCACCCGGCCCCACGGAGAACAAAACCTTGTTACATGGGCACGGCCTTTGTTCAATGACCGTAGGAAGTTTCCAAAGTTGGCAGATCCACGATTGCAAGGTCGGTATCCCATGCGGGGTCTTTACCAAGCTCTAGCTGTGGCATCAATGTGCATTCAAGAACAGGCAGCTGCACGTCCTCTGATTGGGGATGTGGTAACGGCCCTCTCTTATCTAGCCAACCAGGCACATGACACTAACAATGCCGGCATTGGTAATAATAAGGGAACTGGTGATGATAAAAGGAGTAGAGATGATAAAGGTGGAAGAATATTACAAAATGATGAAGGTGGAGGATCTGGACGCAGATGGGATTTGGAAGGATCTGAGAAAGATGACTCCCCACGTGAAACTGCAAGGATGTTAAACAGGGATCTTGATAGAGAACGTGCTGTGGCTGAAGCCAAGATGTGGGGAGAGAACTGGAGAGAAAAAAGACGGCAGAGTGTGCAGGGCAGTTTTGATGCTTCTAATGCCTAG 1413 0.4636 MGCFSCFDSKEDEKLNPNPQQQQQQQETHHQQHDHHVSRLPSAASAGADKLRSTSNGGAFKRELTAALKEGPPGQIAAQTFTFRELAAATKNFRPQSFLGEGGFGRVYKGRLESTGQAVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVSLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFPKLADPRLQGRYPMRGLYQALAVASMCIQEQAAARPLIGDVVTALSYLANQAHDTNNAGIGNNKGTGDDKRSRDDKGGRILQNDEGGGSGRRWDLEGSEKDDSPRETARMLNRDLDRERAVAEAKMWGENWREKRRQSVQGSFDASNA 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00005 470 SUPERFAMILY Protein kinase-like (PK-like) 76 367 IPR011009 -
Tsu01g00005 470 ProSiteProfiles Protein kinase domain profile. 93 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g00005 470 Pfam Protein kinase domain 96 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g00005 470 Gene3D Phosphorylase Kinase; domain 1 77 169 - -
Tsu01g00005 470 Gene3D Transferase(Phosphotransferase) domain 1 170 391 - -
Tsu01g00005 470 MobiDBLite consensus disorder prediction 388 403 - -
Tsu01g00005 470 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL27 2 406 - -
Tsu01g00005 470 PANTHER OS07G0668900 PROTEIN 2 406 - -
Tsu01g00005 470 PANTHER OS07G0668900 PROTEIN 424 462 - -
Tsu01g00005 470 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Tsu01g00005 470 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL27 424 462 - -
Tsu01g00005 470 MobiDBLite consensus disorder prediction 1 56 - -
Tsu01g00005 470 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
Tsu01g00005 470 MobiDBLite consensus disorder prediction 411 436 - -
Tsu01g00005 470 MobiDBLite consensus disorder prediction 376 436 - -
Tsu01g00005 470 CDD STKc_IRAK 99 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00005 Tsu-Chr1 31768 36137 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00005 1 458 Glycoside Hydrolase AT3G07070 55.459 1.17e-168 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Tsu01g00005 Pkinase 7.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00005 K13430 - gmx:100777987 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00005 01 31768 36137 Tsu01g00005 01 31768 36137 ECH