Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05370 ATGGGGATTTGCTGGAGTTATCCACCTAAAGATCCAACTCCAACTGGAACTGTTACACCTGCAGGGATATCTCATTCCCAGACCACAAGTGGAAGCTATGGTATTAGTACAACTACAACCACCACTGCTTCAACAACAACTACTTTCACTATTTCTTCTGGAAGTGGAAGTGGAAGCAGCAGCAATAATAATATGTCTTCCTCCATAAGTAGAAGCAATTTCTCATCAGTCTCTGATTATTCAATTGGTGGCCAGATCTTACCTACTTCTAATTTGAGGATCTTCACTTTTGCTGAATTGAAGGCTGCTACCAAGAATTTCAAAGCTGATACACTTCTTGGTGAAGGAGGTTTTGGTAAAGTCTACAAGGGATGGCTTGATTCCAAGAATAGTAGTAGTGGAACTACCGTTGCCGTCAAGAAATTGAACTCTGAAGGCTACCAAGGACTCGAGGAGTGGAAGTCAGAAATACATTTTCTAGGACGGCTTTATCATCCTAACCTTGTTAAGCTGTTGGGATACTGTTACGAGGAAACAGAACTTCTTCTTGTTTATGAATACATGCAGAAGGGCAGTTTGGAACATCATCTCTTTGGAAGGGGTGCTGCTGTTCAGCCACTTTCTTGGGATCTCAGGCTTAAGATTGCAATTGGAGCTGCTTCTGGCCTTTCCTTCTTGCATACATCCGATAGAGAAATTATTTACAGAGACTTTAAGGCCTCCAATATATTGCTTGATGGGGCCTATAATGCAAAGATATCAGATTTTGGACTTGCAAAGCTAGGTCCTTCAGCAAGTCAATCTCATTTATCAACAACGGTAATGGGCACACCTGGTTATGCAGCTCCTGAATATATGCAAACAGGGCATCTATATGTAAAGAGTGACGTGTATGGGTTTGGAGTTGTTTTGGTTGAGATACTGACAGGCCTACGAGCCATTGATCCCAACCAACCAACCGGGTATCACAGTCTAACCGACTGGATCAAACCGTACCTACAACATAGAAGTAAATTGAAGAAGGTTATGGATAATCACTTGGGAGATAAATATCCAATGAAAGCTGCACTTCCTATAGCTAAGCTTGCTTCAAAATGTCTTGCACCTGAGCCCAAAATGCGCCCCTCCATGAAGGATGTTTTGGAGACCTTGCAGGGAATTCAAGCTTCCACAAACAAAACCGTGGAGGTTAGGGGTCATCATTAA 1206 0.4237 MGICWSYPPKDPTPTGTVTPAGISHSQTTSGSYGISTTTTTTASTTTTFTISSGSGSGSSSNNNMSSSISRSNFSSVSDYSIGGQILPTSNLRIFTFAELKAATKNFKADTLLGEGGFGKVYKGWLDSKNSSSGTTVAVKKLNSEGYQGLEEWKSEIHFLGRLYHPNLVKLLGYCYEETELLLVYEYMQKGSLEHHLFGRGAAVQPLSWDLRLKIAIGAASGLSFLHTSDREIIYRDFKASNILLDGAYNAKISDFGLAKLGPSASQSHLSTTVMGTPGYAAPEYMQTGHLYVKSDVYGFGVVLVEILTGLRAIDPNQPTGYHSLTDWIKPYLQHRSKLKKVMDNHLGDKYPMKAALPIAKLASKCLAPEPKMRPSMKDVLETLQGIQASTNKTVEVRGHH 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05370 401 MobiDBLite consensus disorder prediction 17 36 - -
Trre9g05370 401 Pfam Protein tyrosine and serine/threonine kinase 109 384 IPR001245 GO:0004672|GO:0006468
Trre9g05370 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Trre9g05370 401 MobiDBLite consensus disorder prediction 1 36 - -
Trre9g05370 401 Gene3D Phosphorylase Kinase; domain 1 83 187 - -
Trre9g05370 401 CDD STKc_IRAK 113 387 - -
Trre9g05370 401 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 188 397 - -
Trre9g05370 401 Gene3D Transferase(Phosphotransferase) domain 1 188 399 - -
Trre9g05370 401 PANTHER OS01G0588500 PROTEIN-RELATED 60 388 - -
Trre9g05370 401 SUPERFAMILY Protein kinase-like (PK-like) 84 385 IPR011009 -
Trre9g05370 401 ProSiteProfiles Protein kinase domain profile. 107 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g05370 401 ProSitePatterns Protein kinases ATP-binding region signature. 113 141 IPR017441 GO:0005524
Trre9g05370 401 FunFam Serine/threonine-protein kinase BIK1 74 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05370 Trre-Chr9 58499134 58500734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g05370 81 388 Receptor kinase-like Gene Family AT4G02010 48.553 4.20e-96 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Trre9g05370 PK_Tyr_Ser-Thr 5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05370 - - mtr:11430234 620.157