Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05352 ATGCAACTCAAGAAGCTCAATATTGCTCTTTTCCCTGTTCGTTACAATGACAAATACTATGCTGATGCACTTGCTTCTGCTGAATTCACTAAACTAGCTTACTACAGTGATATTTGTGTTGGCGCAATTGCATGCCGGCTTGAGAAGAAGGAAGGTGGGGGCCAAGTTCGGGTTTATATCATGACTTTGGGTGTTTTAGCGCCTTACCGTGGACTTGGAATTGGAACAAGACTGCTGAATCATGTTCTTGATCTTTGCTCCAAGCAGAACATTTCTGAAGTTTACTTGCATGTGCAGACAAACAATGAAGATGCCATTAACTTTTATAAGAAGTTTGAGTTTGAAATTACAGAAACAATCCAGAACTATTATACAAACATCACACCACCAGACTGCTATGTTCTTACGAGGCACATAGCTCCTAGCCCAACAAAGAAATAA 441 0.4014 MQLKKLNIALFPVRYNDKYYADALASAEFTKLAYYSDICVGAIACRLEKKEGGGQVRVYIMTLGVLAPYRGLGIGTRLLNHVLDLCSKQNISEVYLHVQTNNEDAINFYKKFEFEITETIQNYYTNITPPDCYVLTRHIAPSPTKK 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05352 146 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1 140 IPR000182 GO:0016747
Trre9g05352 146 FunFam Putative n-alpha-acetyltransferase 50 1 140 - -
Trre9g05352 146 Pfam Acetyltransferase (GNAT) family 25 114 IPR000182 GO:0016747
Trre9g05352 146 CDD NAT_SF 32 97 - -
Trre9g05352 146 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 3 124 IPR016181 -
Trre9g05352 146 PANTHER N-ALPHA-ACETYLTRANSFERASE 1 144 - -
Trre9g05352 146 Gene3D - 1 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05352 Trre-Chr9 58320178 58322159 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre9g05352 Acetyltransf_1 7.5e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05352 K20793 - gmx:100499961 281.182