Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre9g05319 | ATGCCTGCTGAAAATTGGGACGGTGAAGTAGAAGCGTTTGCAGAAATCGATCCAACAGGTAGATTCGGTCGTTACAATGATTTACTCGGTTATGGAGCTGTGAAAAAAGTATACAGAGGTTTTGATCAAGAAGAAGGAATTGAAGTTGCATGGAATCAAGTTAAACTTAGGAATTTCAGCGACGATCCTGTTCTTATTAATCGTCTTCATTCTGAAGTTGAATTGCTAAGAAATCTTAGTAACAAATATATCATTGTTTGTTATAGTGTTTGGAAAGATGATGAACATGGTAATATCAATTTTATTACTGAGGTTTGTACTTCTGGAAATCTTAGGGATTATAGGAAGAAACATCGTCATGTTTCGATTAAGGCGTTTAAGAAATGGTCGAAACAAGTTCTTGAAGGATTGGAGTATCTTCATACACATGATCCTTGCATTATTCATAGAGATCTTAATTGCAGTAATATCTTTGTTAATGGGAACATTGGACAGGTGAAAATTGGTGATCTGGGATTGGCTGCAATAGTGGGAAGGAGCCATGCAGCACATTCAATTTTAGGGACTCCTGAGTATATGGCACCTGAGCTGTATGAGGAAGATTACACTGAGATGGTGGACATTTACTCTTTTGGAATGTGTTTGCTTGAAATGGTTACAATGGAGATACCATACAGTGAATGTGACAATGTAGCAAAGATATACAGAAAAGTCACAATGGGAATTAAGCCTCAAGCCTTAAGCAATGTCAGAGATCCAGAAGTGAAAGCATTCATTGAAAAATGCATTGCTCAGCCAAGGGCAAGACCTTCAGCCACTGATCTTCTTAAGGATCCTTTCTTTTCTGAACTCAACAATGATGAAGAATCAACATCTATCAGTACTTGA | 888 | 0.3739 | MPAENWDGEVEAFAEIDPTGRFGRYNDLLGYGAVKKVYRGFDQEEGIEVAWNQVKLRNFSDDPVLINRLHSEVELLRNLSNKYIIVCYSVWKDDEHGNINFITEVCTSGNLRDYRKKHRHVSIKAFKKWSKQVLEGLEYLHTHDPCIIHRDLNCSNIFVNGNIGQVKIGDLGLAAIVGRSHAAHSILGTPEYMAPELYEEDYTEMVDIYSFGMCLLEMVTMEIPYSECDNVAKIYRKVTMGIKPQALSNVRDPEVKAFIEKCIAQPRARPSATDLLKDPFFSELNNDEESTSIST | 295 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre9g05319 | 295 | Gene3D | Phosphorylase Kinase; domain 1 | 8 | 104 | - | - | |
Trre9g05319 | 295 | SUPERFAMILY | Protein kinase-like (PK-like) | 17 | 281 | IPR011009 | - | |
Trre9g05319 | 295 | Pfam | Protein kinase domain | 27 | 281 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre9g05319 | 295 | FunFam | probable serine/threonine-protein kinase WNK9 | 106 | 287 | - | - | |
Trre9g05319 | 295 | CDD | STKc_WNK | 21 | 281 | - | - | |
Trre9g05319 | 295 | ProSiteProfiles | Protein kinase domain profile. | 23 | 281 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre9g05319 | 295 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 9 | 285 | - | - | |
Trre9g05319 | 295 | Gene3D | Transferase(Phosphotransferase) domain 1 | 106 | 287 | - | - | |
Trre9g05319 | 295 | FunFam | Probable serine/threonine-protein kinase WNK1 | 8 | 104 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre9g05319 | Trre-Chr9 | 58064609 | 58066797 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre9g05319 | 7 | 281 | MAP Kinase Kinase Kinase | AT5G55560 | 76.727 | 2.54e-168 | 467 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | WNK_NRBP | Trre9g05319 | Pkinase | 5.9e-51 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre9g05319 | K08867 | - | gmx:100798280 | 550.436 |