Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05316 ATGAAATTATTTGAATTCAAGGGCTATTTCTCATCATTCATTATTCTATATGCCACTATCACATTTTCTTCATCAAAATACCATTCATTTGCTCTCTTAGATTCTACTCCACTGTGCTTGGTTTTCCTTCCTCAAAAACAAATTACAGATAATCTCAAATCTGCTCAGAAGAATGAACTTGCAGTTGAGATGCCGGTAAGATTCTTCATAACTGATTCTACGATGCAGGCATCAGAGCAACATAGAAGTTCAAGTATGTACTATCAACCGTTGCAACAAATGGAAGCCTATTGCTTACCGCAGTATCGAAATCTAAATCATCAGCTATACAACAATGATGGAGGCCACGGAACTCAATTATCGGCTCCAACTTCGTCTGACCTTTATTATTGCACCTTGGAGTCGTCGTCTGCAGCTGGAAGTTTTGCTGTTTACAACTCTCCTTCAACTGTTAGTTTCTCGCCTAACGATAGTCCAATGTCGCAGCAAGATTCACAATCATATCCACCTGATAAGTATCATTCCCCCGACAATACCTATGGCTCTCCAATGAGTGGATCGTGCATAACCGAAGATTTAAGTAGTTTTAAGCACAAGCTGAGAGAATTGGAAAATGTAATGCTTGGTCCTGACTCTGATAATCTTGATAGTTACGACAGTGCCATGAGCAACGGAACCAATTTCGTTTCGCTTGAAATGGACAGTTGGAGACAAACAATGGTAGCGATTTCGAGCAAAAATCTAAAGCATATCCTTACTGCATGTGCCAAAGCAATTGCAGACAATGATTATCTAATGGCACAGTGGCTGATGGACGAATTACGGCAGATGGTGTCGGTTTCTGGTGAACCTATTCAAAGGTTGGGAGCATACATGTTGGAAGGACTCGTTGCACGGTTGTCTGCTTCTGGGAGTTCAATCTACAAATCATTAAGATGCAAAGAACCGGAAAGTGCCGAGCTTCTCTCTTACATGAACATACTTTATGAGGTTTGCCCTTACTTCAAATTCGGATACATGTCTGCAAACGGAGCCATTGCAGAAGCAATGAAAAATGAAGCCAGAGTTCATATTATTGATTTCCAAATAGCTCAAGGAAGCCAATGGATTTCTTTGATTCAAGCTTTTGCAGCTAGGCCTGGTGGGCCACCACACATCCGTATTACAGGTATCGATGATTCGACCTCAGCTTATGCCCGTGGAGGTGGACTTCATATAGTTGAAAAGAGGTTATCAAAGCTTGCTCAGCATTTCAAGGTTCCATTTGAATTTCATGCCGCAGCTATCTCCGGTTGTGATGTTCAACTGCATAACCTCAGAGTTCGACCTGGGGAAGCTCTTGCAGTAAATTTTGCATTCATGCTACATCACATGCCTGATGAGAGTGTCAGCACTCAGAATCATAGGGATAGGCTTCTGAGGTTAGTTAAAAGCCTATCACCAAAAGTCGTGACACTTGTCGAGCAAGAATCTAACACAAACACTGCGGCATTCTTTCCGCGTTTCCTTGAAACTATGGACTATTACACGGCAATGTTCGAGTCAATAGACGTGACTCTCCCGAGAGAGCATAAAGAGAGAATTAATGTTGAGCAGCATTGCTTGGCAAGAGACTTAGTTAACATCATAGCTTGTGAGGGGGTAGAGAGAGTGGAACGACACGAACTGCTAGGGAAATGGAGATCAAGATTTGCAATGGCTGGTTTCACTCCTTACCCTCTGAGTTCATTGGTGAATGGTACCATAAAGAAATTGCTTGAGAATTACAGTGATAGATATAGACTACAAGAGAGAGATGGAGCTTTATACCTTGGTTGGATGAATAGAGATTTGGTTGCTTCTTGTGCTTGGAAATGA 1857 0.4179 MKLFEFKGYFSSFIILYATITFSSSKYHSFALLDSTPLCLVFLPQKQITDNLKSAQKNELAVEMPVRFFITDSTMQASEQHRSSSMYYQPLQQMEAYCLPQYRNLNHQLYNNDGGHGTQLSAPTSSDLYYCTLESSSAAGSFAVYNSPSTVSFSPNDSPMSQQDSQSYPPDKYHSPDNTYGSPMSGSCITEDLSSFKHKLRELENVMLGPDSDNLDSYDSAMSNGTNFVSLEMDSWRQTMVAISSKNLKHILTACAKAIADNDYLMAQWLMDELRQMVSVSGEPIQRLGAYMLEGLVARLSASGSSIYKSLRCKEPESAELLSYMNILYEVCPYFKFGYMSANGAIAEAMKNEARVHIIDFQIAQGSQWISLIQAFAARPGGPPHIRITGIDDSTSAYARGGGLHIVEKRLSKLAQHFKVPFEFHAAAISGCDVQLHNLRVRPGEALAVNFAFMLHHMPDESVSTQNHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETMDYYTAMFESIDVTLPREHKERINVEQHCLARDLVNIIACEGVERVERHELLGKWRSRFAMAGFTPYPLSSLVNGTIKKLLENYSDRYRLQERDGALYLGWMNRDLVASCAWK 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05316 618 MobiDBLite consensus disorder prediction 153 181 - -
Trre9g05316 618 ProSiteProfiles GRAS family profile. 239 618 IPR005202 -
Trre9g05316 618 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 205 612 IPR005202 -
Trre9g05316 618 Pfam GRAS domain family 248 618 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05316 Trre-Chr9 58045448 58051631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g05316 86 618 GRAS Transcription Factor Family AT5G48150 65.434 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre9g05316 GRAS 1.1e-136 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05316 - - gmx:100808300 1001.5