Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05290 ATGGAAGCGAATAAAGAGGAAGCACTTAAGGCAATAGAGATTGCTGAGAAGCGATTTGCTCAGAGAGACTTTGCAGGCGCAAAAAACTATGCTTTAAAGGCGAAAACGCTTTGTCCTGAGTTGGAGGGTATATCTCAAATGGTGTCCACGTTTGATGTTTACATTGCTTCTGAGTTCAGACATAATGGTGAACTCGATTATTATTCGGTTCTCGGACTAAAACCTACTGCAGATAAAGAGGCTGTTAAAAGACAGTACAAGAAGTTGGCAGTGTTACTTCATCCAGATAAGAACAAATGTGTCGGAGCTGATGGAGCGTTTAAGCTTGTTTCCGAGGCGTGGACTTGGCTTGACAATGCCATGCGTAGTTCTTACGATCGCAAGAGAAATTATGCTTCTTTTCATGCTACAGGTTATAACAAATGTTCCAATTTGTCGGCCTCTCGTAATAAACTAGACACATTTTGGACAATTTGTACTTCTTGTAAGGTTCAATATGAGTATCTGCGTAAGTATGTGAATAAAAAACTCTCATGTAAGAACTGCCGTGGCATTTTCATTGCTGTTGAAACTGGAGCAGCCCCAGCAAATGGTTCATTTCCATACACTCCTTTGCCATATGTGCCGGGAAATGGTTATGCAAATCATTCATTTGACGGGGTTACATATGTTCCTACTAATGCCACCTATTTTAATGGGAATGGTGTCGCAGGATACCATTCTGGACACGGTTACGAGTATGTTTCAAATGTTTCGTTTCAGTTGGGCTCTGCTGGACTTATCCATCAAAATGGATCGGGCACTACCTTACCTGCTGGTTCCGTTTATCGTGTCAACGGACATGGGAAGAGGGGAAGACCAAAGGTCAAATCTGGAGTCAATGGAAGGCATCCTATGGCGGAGACTGTGATCAATATAAACTCGCATGTATCTTTCTCAGGTAATGAACCACAAGAAGTTAAGCCAGGTAGACCTGAAAAGAAACGCAAACTTACGGTGGGATCCGATTTCCGAAATGGCTCTGTCGAGAAGGGGTCAAAATGTGCTTCAGAAGCAGTAGTGTCAAATGGCCAAAAGGTTCCCTGCGTAAATGAAATTCAAACCAAACATTGTTTCACGCCACCTGCATTTGACGCGAGAAAATTATTGATTGAGAAAGCCAGGACAGTCATTAGGAAGAAACTCGAAGAGATGAAGCTGTCATCTGAAGCTGCAACTCTGAATGAGAAAGAAAAGGCACAAGTTGATGTTTGTCCAGTAAAAAAAGAGACATGTAGGAGAGCACCTCAGAATGTTTCTGGCCTTCCATTGGAGCAAGGAAAAGTCAATCCGATCTCAATAACTGTCCCTGATTCTGACTTTCATGACTTCGATAAAGATAGGACAGAGGAATGTTTCAAGCCAAAGCAAATATGGGCCTTATATGACGAGGAAGATGGAATGCCGCGATTGTATTGTCTGATCCGTGAGGTTATATCTGTTAATCCATTTAAGATTCATATCAGTTACTTGAATTCCAAAACGGATAGCGAATTTGGCTCAGTAAACTGGCTTGAATCAGGTTTTACCAAATCTTGTGGAAATTTCAGGGCTTGGACTTCAGATATTGTCGACCAAGTTAACATATTTTCTCATGTTCTAAGCCGGGAGAAGGCTGGTCGAGGTGGTTGTGTTCGCATATATCCTAGAAGTGGAGATATTTGGGCTGTTTATCGAAATTGGTCACCAGATTGGAACCGATCTACACCGGACAAAGTAAGGCATGAATATGACATGGTGGAGGTGCTGTATGATTACTCGGAGGATCTCGGTGTTTGTGTTACTCCCCTTATTAAATTATCTGGATTTAAAACAGTTTACAAAAGGAATCCTGACAACGGTGCCGAACGATGGATACCGAGAAGAGAAATGGTACGCTTTTCTCACCAAGTTCCTTATTGGTTGCTGAAAGGAGAGGAAAGCAATTTGCCCGATCGGTGTTTTGACCTTGATCCAGCCGCAACTCCAGACGGGCTTCTTCATATTGCTACTACAGAAGGAAATGCTTTGTAG 2052 0.423 MEANKEEALKAIEIAEKRFAQRDFAGAKNYALKAKTLCPELEGISQMVSTFDVYIASEFRHNGELDYYSVLGLKPTADKEAVKRQYKKLAVLLHPDKNKCVGADGAFKLVSEAWTWLDNAMRSSYDRKRNYASFHATGYNKCSNLSASRNKLDTFWTICTSCKVQYEYLRKYVNKKLSCKNCRGIFIAVETGAAPANGSFPYTPLPYVPGNGYANHSFDGVTYVPTNATYFNGNGVAGYHSGHGYEYVSNVSFQLGSAGLIHQNGSGTTLPAGSVYRVNGHGKRGRPKVKSGVNGRHPMAETVININSHVSFSGNEPQEVKPGRPEKKRKLTVGSDFRNGSVEKGSKCASEAVVSNGQKVPCVNEIQTKHCFTPPAFDARKLLIEKARTVIRKKLEEMKLSSEAATLNEKEKAQVDVCPVKKETCRRAPQNVSGLPLEQGKVNPISITVPDSDFHDFDKDRTEECFKPKQIWALYDEEDGMPRLYCLIREVISVNPFKIHISYLNSKTDSEFGSVNWLESGFTKSCGNFRAWTSDIVDQVNIFSHVLSREKAGRGGCVRIYPRSGDIWAVYRNWSPDWNRSTPDKVRHEYDMVEVLYDYSEDLGVCVTPLIKLSGFKTVYKRNPDNGAERWIPRREMVRFSHQVPYWLLKGEESNLPDRCFDLDPAATPDGLLHIATTEGNAL 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05290 683 Gene3D DnaJ domain 56 147 IPR036869 -
Trre9g05290 683 PANTHER BNAC03G44070D PROTEIN 1 669 - -
Trre9g05290 683 PRINTS DnaJ domain signature 68 86 IPR001623 -
Trre9g05290 683 PRINTS DnaJ domain signature 86 101 IPR001623 -
Trre9g05290 683 PRINTS DnaJ domain signature 102 122 IPR001623 -
Trre9g05290 683 SUPERFAMILY Chaperone J-domain 59 130 IPR036869 -
Trre9g05290 683 CDD DnaJ 66 114 IPR001623 -
Trre9g05290 683 ProSiteProfiles dnaJ domain profile. 66 129 IPR001623 -
Trre9g05290 683 SMART dnaj_3 65 122 IPR001623 -
Trre9g05290 683 Pfam DnaJ domain 66 126 IPR001623 -
Trre9g05290 683 Pfam Domain of unknown function (DUF3444) 446 653 IPR024593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05290 Trre-Chr9 57813775 57815826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g05290 4 288 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.519 1.72e-29 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05290 - - gmx:100792639 1081.24