Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05261 ATGTCTTCCTCCATTTTTCAGCTTATTAATATTATTTCATCTTTTCTTGTTTGCACTTTCTTCTTGCAAGTGCAACCTTCCTATGCCATTGGAAAGTCCTATGTTGTTTACTTAGGAGCACATTCTCATGGCCTAAATCCTTCTTCTGCTGATTTAGACTATGCAACAAATTCCCATTATAGTTTATTGAGCTCCATCCTAGGGAGCCATGCGAGAGCCAAGGAAGCAATATTCTATTCCTATAATAGACACATCAATGGTTTTGCAGCAATATTGGAAGAAAAAGAAGCAGAAGAGCTTGCAAGAAATCCAAAAGTAGTTTCTGTATCTTTGAACAAAATGCATCAATTGCATACAACAAGGTCATGGGAATTTCTTGGACTAGAAGGAAATGGAATAGTTCCTAAGGACTCCTCCATTTGGGAGAAGGCAAGATATGGTGAAGATACGATCATTGGTAACCTTGATACAGGTGTATGGCCAGAATCTCAGAGCTTTAGTGACCAAGGAATGAGCCCTATTCCATCAAAGTGGCGCGGAAATGGGATATGCCAAATCGACAATTTTATTGACTCTAACAAAACTTATTGCAACAGGAAGCTTATAGGAGCAAGAGTTTTCCACAAAGGCTATGAAGCATATCTAGGAAAACTCGGTGCATCATTTTACACCGCACGGGACACAGTAGGCCATGGTTCTCACACTCTATCAACAGCTGGAGGTAATTTTGTTCAAGGAGTAAGTGTTTTTGGCAATGGTAATGGCACTGCAAAAGGTGGATCTCCAAAGGCTCGTGTTGCGGCCTACAAAGTGTGTTGGCTACATGGCTGCGATGGTGCAGATATCTTAGCAGGTTTTGAGGCTGTCATAAGTGATGGTGTTGATGTTCTTTCGGTTTCTCTTGGAGGAAGGACTAAAAATCTCTTTTCAGATCCAGTTGCTATAGGTTCCTTCCATGCAGTTGCAAATGGTATAGTAGTAGTTAGTTCTGCTGGAAATGCAGGACCTTATTTTGAAACTATTTCAAATGTGGCACCTTGGTTATTCACTGTTGCCGCTAGCACAATCGATAGAGACTTCACAAGTTATGTTAAACTAGGTGACAACAAGTACATTAAGGGAACAAGTCTTTCATCTAAGGACTTGCCATCGCACGAGTTCTATCCTTTGATTAGTGCTAAAGAAGCCAAACATTTCTACGTTCTATCTAGAGAAGCGAAATTCTGTAGATATGGAACTCTTGATGTCAAAAAGGTGAAGGGAAAAGTAGTGGTATGCCTTGAAGATGAATTACTCGGAATTGCTAATGCCGGTTCAGAAGCTTTTTCTGCAGGAGCAGTAGGAATGGTTTTGGCTAGTGATTATAAAAGCTTTTATGATTTTATTGCATACCCTCATGTTTTGCCTACTTCATATGTCAATTACACTGATGGTCAATATATTTATTCTTACATCCAAAGTGAAAATAACCCTGTTGCTTACATAACAAAAGCAATAACAGAAATTCCAATTATTCCAGCTCCAGTTATTGCTTCATTTTCATCAAGGGGACCTAGCACAATTCTTCCTTCAATTCTAAAACCTGATATTACTGCACCTGGAGTGAACATAATTGCTGCTTACTCAGAAGCCACAGGTGTATTTGGAATAAAATCAAATAATAGGATTCCATATAATTCCTTTTCAGGAACTTCTATGTCATGCCCTCATGTGTCTGGCATAGTAGGTCTTCTCAAGACACTTCATCCTGAATGGAGTCCAGCAGCTATCAAATCAGCAATTATGACCACTGCAAGTGAAATGGACAACAGCAAAAGACCTATCGAGGATCGATTCTATGAAAATGCAACTCCATTTGCGTATGGTTCGGGTCATATTCAGCCTGATCTAGCGATAGACCCGGGACTAGTTTATGATCTTAATGTGGTTGATTACTTGAACCTATTATGTGGTTATAATCAAAGCCATAAACAAATTAAGGCTCTTTACAACAAGCCATTCATTTGTCCAAAGTCCTACAATGTGTTGGATTTCAACTACCCTACAATCACAATACTCGATCTCGAGGACAAAACCGTAAATGTTAGTCGAACCGTTACAAATGTTGGACCTCCGAGTATATATATCATGCAAGCCAAGGCACCTGATGGAGTTTCAATTTTGGTTGAGCCAAGTTACTTGAGCTTTAAGGAAGTTGGTGAGAAAAAATCATTCAAGGTTATTGTGATGAAAACTATGGATAATGGTAATGGTGTTTCTACTACATTGGATTATGTATTTGGGGAATTATTGTGGACAAATGGAAATCATAAAGTAAGGAGTACTATTGCAGTGAAGTTCAAGTAG 2346 0.3896 MSSSIFQLINIISSFLVCTFFLQVQPSYAIGKSYVVYLGAHSHGLNPSSADLDYATNSHYSLLSSILGSHARAKEAIFYSYNRHINGFAAILEEKEAEELARNPKVVSVSLNKMHQLHTTRSWEFLGLEGNGIVPKDSSIWEKARYGEDTIIGNLDTGVWPESQSFSDQGMSPIPSKWRGNGICQIDNFIDSNKTYCNRKLIGARVFHKGYEAYLGKLGASFYTARDTVGHGSHTLSTAGGNFVQGVSVFGNGNGTAKGGSPKARVAAYKVCWLHGCDGADILAGFEAVISDGVDVLSVSLGGRTKNLFSDPVAIGSFHAVANGIVVVSSAGNAGPYFETISNVAPWLFTVAASTIDRDFTSYVKLGDNKYIKGTSLSSKDLPSHEFYPLISAKEAKHFYVLSREAKFCRYGTLDVKKVKGKVVVCLEDELLGIANAGSEAFSAGAVGMVLASDYKSFYDFIAYPHVLPTSYVNYTDGQYIYSYIQSENNPVAYITKAITEIPIIPAPVIASFSSRGPSTILPSILKPDITAPGVNIIAAYSEATGVFGIKSNNRIPYNSFSGTSMSCPHVSGIVGLLKTLHPEWSPAAIKSAIMTTASEMDNSKRPIEDRFYENATPFAYGSGHIQPDLAIDPGLVYDLNVVDYLNLLCGYNQSHKQIKALYNKPFICPKSYNVLDFNYPTITILDLEDKTVNVSRTVTNVGPPSIYIMQAKAPDGVSILVEPSYLSFKEVGEKKSFKVIVMKTMDNGNGVSTTLDYVFGELLWTNGNHKVRSTIAVKFK 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05261 781 ProSiteProfiles Serine proteases, subtilase domain profile. 122 632 - -
Trre9g05261 781 FunFam Subtilisin-like protease SBT5.3 23 118 - -
Trre9g05261 781 Gene3D Peptidase S8/S53 domain 149 645 IPR036852 GO:0004252|GO:0006508
Trre9g05261 781 Pfam Fibronectin type-III domain 677 778 IPR041469 -
Trre9g05261 781 CDD PA_subtilisin_like 363 495 - -
Trre9g05261 781 Pfam Subtilase family 147 609 IPR000209 GO:0006508|GO:0008236
Trre9g05261 781 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 118 IPR037045 -
Trre9g05261 781 FunFam subtilisin-like protease SBT1.5 357 502 - -
Trre9g05261 781 Pfam Peptidase inhibitor I9 33 118 IPR010259 -
Trre9g05261 781 Gene3D - 357 502 - -
Trre9g05261 781 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 70 778 IPR045051 -
Trre9g05261 781 SUPERFAMILY Subtilisin-like 117 636 IPR036852 GO:0004252|GO:0006508
Trre9g05261 781 FunFam Subtilisin-like protease SBT1.5 149 368 - -
Trre9g05261 781 CDD Peptidases_S8_3 115 599 IPR034197 -
Trre9g05261 781 PRINTS Subtilisin serine protease family (S8) signature 562 578 IPR015500 -
Trre9g05261 781 PRINTS Subtilisin serine protease family (S8) signature 147 166 IPR015500 -
Trre9g05261 781 PRINTS Subtilisin serine protease family (S8) signature 227 240 IPR015500 -
Trre9g05261 781 Gene3D - 649 780 - -
Trre9g05261 781 ProSitePatterns Serine proteases, subtilase family, serine active site. 563 573 IPR023828 -
Trre9g05261 781 Pfam PA domain 405 480 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05261 Trre-Chr9 57588251 57592363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g05261 33 780 Subtilisin-like Serine Gene Family AT2G04160 53.765 0.0 779
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05261 - - pcin:129318364 920.613