Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05184 ATGAGGTTCACTGAGAGTTTCAGTGTCAACAATTTGTTTCCTTCCAGACATTGGCTACATGTAATTAGTTGTATGGTGCATAAATTGAAGAGATTGCATAGAAATGGTGATATGATTCTTGAGAGGATCATCAACAAAGCAACAACAGAGATAGGTGGAGATGAAAGTCTTTTATCTTATCTTTTGAGTCTCAAAGAAGAAGAAGTTTCTTCTAACCCGATTGGATTTCATTTGACAATCAACAACATTAAAGCCGTTATTCAGGATATGCTTGTTGGTGGAATTGAGACAACATCAATAACTTTGGAATGGGCTTTCTCAGAAATGATGAAAAATCCAAGAGTGCTGAAAAAGGCACAAGAAGAAGTTAGACAAGTTTGTAATGGCAAAGGATATGTTAATGAAACTGACCTTCAAGAACTTAGATTTTTAAAAGCAGTAATCAAAGAAACCTTAAGATTGCACCCTCCTGTTCATCTACTTCTAAGAGAGTGTATTGAAACATGTGAAATTAATGGATACACAATACCAGCTGGAACACAAATGTTAGTGAATGCATCGGCAATTGGAAGAGACGAAAAGTATTGGATTGAAGGAGAAAAGTTTTATCCCGAGAGATTCGTGGATTGTCCAATTGATTACAAAGGGTCTAATTTTGAGTTCTTACCTTTTGGCGCAGGAAGGAGAATGTGTCCCGGTATCTTATTTGCTACACCTAATATAGAACTTCTTCTTGCAAAGTTGCTCTACCATTTTGATTGGGAGCTTCCCTATGAAACTGAGCATGAAAGTTTTGACATGACTGAATCTTTTGGCGTTGCATTAAAAAGGAAAAGTCGTCTATATGTAGTTCCAATTCCTTATATTAATCCTGCAGCACCTCTTGAATAA 891 0.3625 MRFTESFSVNNLFPSRHWLHVISCMVHKLKRLHRNGDMILERIINKATTEIGGDESLLSYLLSLKEEEVSSNPIGFHLTINNIKAVIQDMLVGGIETTSITLEWAFSEMMKNPRVLKKAQEEVRQVCNGKGYVNETDLQELRFLKAVIKETLRLHPPVHLLLRECIETCEINGYTIPAGTQMLVNASAIGRDEKYWIEGEKFYPERFVDCPIDYKGSNFEFLPFGAGRRMCPGILFATPNIELLLAKLLYHFDWELPYETEHESFDMTESFGVALKRKSRLYVVPIPYINPAAPLE 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05184 296 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 224 233 IPR017972 GO:0005506|GO:0016705
Trre9g05184 296 SUPERFAMILY Cytochrome P450 8 287 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05184 296 PRINTS E-class P450 group I signature 221 231 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05184 296 PRINTS E-class P450 group I signature 82 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05184 296 PRINTS E-class P450 group I signature 102 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05184 296 PRINTS E-class P450 group I signature 231 254 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05184 296 PRINTS E-class P450 group I signature 145 163 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05184 296 PRINTS E-class P450 group I signature 185 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05184 296 PRINTS P450 superfamily signature 222 231 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05184 296 PRINTS P450 superfamily signature 93 110 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05184 296 PRINTS P450 superfamily signature 146 157 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05184 296 FunFam Predicted protein 91 283 - -
Trre9g05184 296 Pfam Cytochrome P450 8 278 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05184 296 PANTHER OS08G0105600 PROTEIN 2 289 - -
Trre9g05184 296 Gene3D Cytochrome P450 1 284 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05184 Trre-Chr9 57048739 57049897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g05184 3 290 Cytochrome P450 AT3G26330 44.863 6.11e-77 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05184 - K23807 zju:112488857 315.464