Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05182 ATGGAGGATAATTTCCCCATCCTTTTGAGTCTTACCCTCTTAATGTTTTTGATCCTATATGTGACAAAGAGATTCAGAACTAAAAGTAGTAGTGACAACATTACCTCAAACCTTCCACCAGGACCTTGGAAAATACCAATTTTTGGAAGCATACATCACCTCATTGGTTCTCTACCACACCACAAAATGAGAGAATTGTCCCAAAAATATGGTCCTCTCATGCACCTACAACTTGGAGAAACATCAGCAATAGTTGTTTCTTCTAAAGAACTTGCAAAAGAGGTGTTGAAAACAAATGAAGTCAGTTTTGCTCAAAGACCTCGCTCTCTTGGTATAGAAATTATTTCTTATGGTTGCACTGATATTGTATTTTCACCCTATGGAGACTATTGGAGGCAGCTAAGAAAAATTTGCACATTGGAACTTTTAACTGCTAAACGTGTGAGATCATTCCGGTCGATTCGAGAAGAAGAGGTGTCAAAGTTAATTAGACATATTTCTACAAACACAGGATCTACTATCAATCTCACAGATGAAATCTTATCTATGACATATAACATAGTTTCCAGGGCATCTTTTGGTGATAAATGCAAGGACCAAGAAGCTTATATCTTGTTCATGAAGGAATGTATGAGGTTGGCTGAAAATTTCAGTGTCAGTAATTTGTTTCCCTCCAAACATTGGCTACATGTGATTAGTGGAATGGTGCATAAATTGAAGAGATTGCATAAAAGTGGTGATATGGTTCTTGAAAAGATCATCAACAAAGCAACAAAAAAGACCTGTGGAGATGGAAGTCTTCTTTCCTATCTTTTAAAGCTCAAAGGTGACAGCTCTTCTAATCCGACTGGATTTCATTTGACAATCAACAACATTAAAGCTATTATTCAGGATATGCTTATCGGTGGAAGTGATTCATCATCTTTAACTATGGAATGGGCTTTCTCAGAAATGCTGAAAAATCCTCAAGCACTGAAAAGGGCTCAAGAAGAAGTTAGACAGACTTTTGGTAGTAGAGGATATGTTGATGAAATGGATCTTCAAGAACTGAAATTTCTAAAAGCAGTTATTAAAGAAACCTTAAGATTACACCCTATTAATCCTATATATTCAAGAGAGTGTATTAAAACGTGTGAGATAAATGGATACAGAATTCCATCTGGAACACAAGTGTTTGTGAATGCGTGGGCAATTGGACGAGACCAAAAGTACTGGATTGAAGGAGAAAAGTTTTATCCAGAGAGGTTCTTGGACTGTTCAATTGATTACAAAGGGTCCGATTTTGAGTTATTGCCTTTTGGTGCCGGAAGGAGAATGTGTCCTGGAATCTCTTTTGCTACACCTAATATAGAACTTGCTCTAGCGCAACTGCTGTACTATTTTGATTGGGAGTTTCCCTTTGGTACCAGTCATGAAAATTTTGACATGACCGAAGCCTTTGGCGCTGTAGTGAAAAGGAAAAGTGAACTAATTGTAATTCCAACTGCTTACAATCCTTGA 1500 0.372 MEDNFPILLSLTLLMFLILYVTKRFRTKSSSDNITSNLPPGPWKIPIFGSIHHLIGSLPHHKMRELSQKYGPLMHLQLGETSAIVVSSKELAKEVLKTNEVSFAQRPRSLGIEIISYGCTDIVFSPYGDYWRQLRKICTLELLTAKRVRSFRSIREEEVSKLIRHISTNTGSTINLTDEILSMTYNIVSRASFGDKCKDQEAYILFMKECMRLAENFSVSNLFPSKHWLHVISGMVHKLKRLHKSGDMVLEKIINKATKKTCGDGSLLSYLLKLKGDSSSNPTGFHLTINNIKAIIQDMLIGGSDSSSLTMEWAFSEMLKNPQALKRAQEEVRQTFGSRGYVDEMDLQELKFLKAVIKETLRLHPINPIYSRECIKTCEINGYRIPSGTQVFVNAWAIGRDQKYWIEGEKFYPERFLDCSIDYKGSDFELLPFGAGRRMCPGISFATPNIELALAQLLYYFDWEFPFGTSHENFDMTEAFGAVVKRKSELIVIPTAYNP 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05182 499 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05182 499 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05182 499 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05182 499 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05182 499 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05182 499 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05182 499 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05182 499 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05182 499 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05182 499 PANTHER OS08G0105600 PROTEIN 61 498 - -
Trre9g05182 499 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05182 499 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05182 499 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05182 499 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05182 499 Gene3D Cytochrome P450 32 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05182 499 Pfam Cytochrome P450 39 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05182 499 SUPERFAMILY Cytochrome P450 39 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05182 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Trre9g05182 499 FunFam Cytochrome P450 99A2 28 495 - -
Trre9g05182 499 CDD CYP71-like 69 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05182 Trre-Chr9 57037316 57038943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g05182 36 486 Cytochrome P450 AT3G48310 40.839 7.16e-124 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05182 - K23807 gmx:100779851 558.14