Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05163 ATGGAGTTTCACAACCCTTTCTCTTGTACCTTCATAGCCACCTTTATTTTCCTCTTCATGCTATTCAAAATAGTTAAGAAATGGAGTACTTGTAAAAACTCCATCACTAATTTACCACCAGGACCATGGACACTACCCCTCATAGGAAACATACACCAAATTATCACCAGCTCAATGCCTCATCAATGCTTAAAAATTTTAGCAGAGAAATATGGACCCTTAATGTACCTAAAACTAGGTGAAGTACCATACATCGTAGTTACTTCACCAGAGTTAGCCAAAGAGGTTATGAAAACACAAGACTTAAACTTCTGTCATAGGCCAAACCTTCTTTTGCCTACAATATTTACTTACAATGCTACAGATATTGCATTTTCTCCATACGGAGATTACTGGAGGCAACTACGAAAAATATGCATTGTAGAGCTCTTAAGTTTAAAACGTGTCGAATCATTTCGGTCCATACGAGAAGAAGAGGTTTCAAAACTAGTTAAATCAATTTCTACATGTGAAGGATCAGTTGTTAATCTCACTGAGAACATATTCTCAATGACATATGGGATAACAGCAAGAGCAGTTTTCGGGAAAAGGACCAAACACCAACAAAAGTTTAAAACTGCGATGGAGGAAGTAGTAAGCTTGTTGGGAGGATTTTGTATTGCTGATTTGTATCCTTCCATTAGAATATTGCTTCAGAGGGCGAGTAAGGCAAAGACTAGACTTGAAAAACTTCATAGAGAAACTGATAAGATATTGCAAGATATCATCAATGATCACAAAAGCAGTCATGGAGATGAAGATGTAGTTGATTTGCTTCTCAAGTTTCAGCATGGTAATATTGATCACTTGCAAAATCACTTGACTGATGACAATATTAAAGCAGTTATTCAGAACTTGTTCACTGCTGGTAGCGAAACATCCTCATGGACTGTGGTATGGGCGATGTCTGAGATGGTAAAGAATCCAAAGGTGATGGAAGAAGCACAAGCAGAGGTAAGAAGGGTGTTTGATAGAAAGAAGTATGTAGATGAGACAGAGTTGCACCAATTGATATACTTAAAGTCTGTCATCAAAGAAACAATGAGGTTGCATCCTCCTCTACCATTATTGATTCCAAGAGAAAGTAGGGAGACATGTGAAATCAACGGGTATGAGATCCCTGCTAAGACAAGGGTTGCTGTCAACATTTGGGCCATTGCAAGAGATCCAAGTTATTGGGACGAAGCCGAGAGTTTTAAACCTGAAAGGTTTGTTAATAGAACAATTGATTTTAAAGGTACAAACTTTGAATATATTCCATTTGGTGCTGGAAGGAGGATCTGTCCGGGTATAGCATTTGCTTTACCCAATGTTGAACTGCCACTTGCTATGTTACTTTACCACTTTGATTGGAAGCTTCCCAATGGAATGAAGAACGAAGAACTTGACATGAGTGAGTCATTTGGATTTAGTCTAAGAAGAAAAAATGACCTCTGTTTGATTCCTATTACTCGGCGTCCTTAA 1503 0.3806 MEFHNPFSCTFIATFIFLFMLFKIVKKWSTCKNSITNLPPGPWTLPLIGNIHQIITSSMPHQCLKILAEKYGPLMYLKLGEVPYIVVTSPELAKEVMKTQDLNFCHRPNLLLPTIFTYNATDIAFSPYGDYWRQLRKICIVELLSLKRVESFRSIREEEVSKLVKSISTCEGSVVNLTENIFSMTYGITARAVFGKRTKHQQKFKTAMEEVVSLLGGFCIADLYPSIRILLQRASKAKTRLEKLHRETDKILQDIINDHKSSHGDEDVVDLLLKFQHGNIDHLQNHLTDDNIKAVIQNLFTAGSETSSWTVVWAMSEMVKNPKVMEEAQAEVRRVFDRKKYVDETELHQLIYLKSVIKETMRLHPPLPLLIPRESRETCEINGYEIPAKTRVAVNIWAIARDPSYWDEAESFKPERFVNRTIDFKGTNFEYIPFGAGRRICPGIAFALPNVELPLAMLLYHFDWKLPNGMKNEELDMSESFGFSLRRKNDLCLIPITRRP 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05163 500 Pfam Cytochrome P450 39 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05163 500 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05163 500 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05163 500 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05163 500 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05163 500 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05163 500 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05163 500 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05163 500 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05163 500 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05163 500 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05163 500 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05163 500 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05163 500 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05163 500 CDD CYP71-like 70 491 - -
Trre9g05163 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Trre9g05163 500 PANTHER CYTOCHROME P450 71B11-RELATED 21 496 - -
Trre9g05163 500 FunFam Cytochrome P450 71D8 31 495 - -
Trre9g05163 500 Gene3D Cytochrome P450 31 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05163 500 SUPERFAMILY Cytochrome P450 39 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05163 500 Coils Coil 227 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05163 Trre-Chr9 56936004 56937736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g05163 16 496 Cytochrome P450 AT5G25140 42.300 2.21e-142 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05163 - - mtr:11442302 728.398