Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05154 ATGGAACTTCACAGCCATTTCTCTAATACTATTACCTTCATGGCCTCCTTTCTCTTCCTCTTGGTGCTATTCAAATTAGTTAAAACCTGGAGTTGTAACAATTCCGCTCTGAATTTACCACCAGGACCATGGACTCTACCCCTCATAGGAAACATACACCAGATTATTACCAGTTCACTTCCTCATAGCCGCTTCAAAAATCTGGCTATGAAATATGGACCCTTAATGCATCTAAAACTAGGAGAGGTATCTTACATAATAGTTAGTTCACCAGAAATGGCCAAAGAGATTATGAAAACACATGACCTTATCTTTTGTGATAGACCAAACCTTCTTTTATCCACAATACTTAGTTACAATGCTACAGATATTGCTTTCTCTAAATATGGAGAATACTGGAGGCAAATACGAAAGATATGTGTTATAGAGCTATTAAGTGTGAAGCGTGTTCGATCATTTAGGTACATAAGAGAGGAAGAAGTGTCGAATCTTGTTAAATCAATAGCTGCGAGCGAAGGATCAGTTGTTAATCTCACTCAGAAAATTTTGGCAACGACATATGGGATAACAGCACGGATAGCTTTTGGGAAAAGGAATATACATCAAGAAGCGTTCAAATTAGCAATCGAGGAAGCATTGATCCTGTTGGGAGGAGTCTGTATTGTTGATTTGTATCCTTCTATTAAAATTCTTCGAAGGATGAGTAGGGCGAAGACCAAACTTGAAAAAGCTCAAAGAGATCTTGATACAATATTGCAAGACATCATCGATGATCATCGTAGAGAAGAAAGCAAGGATGAAGATCTAGTTGATGTTCTTCTGAATATTCAACAAGAAAATTATCACTCACAACATCCCTTGACTGATGACAATTTGAAAGCAATCATCCAGGACATGTTCACTGCTGGTGGCGAAACATCGTCATGGACTGTGGTATGGGCGATGTCTGAGATGGTAAAGAACCCAAAGGTGATGGAAGAAGCACAAAGTGAGGTAAGAAGAGTGTTTGATAAAAAGGGATTTGTGGACGAAACAGATTTTCACCAATTGATATACTTAAAGTCTATCATCAAAGAAACATTGAGGCTACATCCATCTCTAACGCTGTTAGTTCCAAGAGAAAGTAGAGAGAGGTGCCAAATCAAAGGATATGAGATTCCAGCAAAGACAAGGGTCATTGTCAACATATGGGCTATTGGAAGAGATCCAAGGTATTGGGTTGAAGCTGAGAGTTTTAAACCTGAGAGGTTTCTTAAAATCCCAATTGATTTCAAAGGCACAAACTTTGAATATATACCATTTGGTGCGGGAAGAAGGATGTGTCCTGGAATGTCATTTGCCTTGCCCAACGTTGAGCTACCTCTTGCTCAGTTACTTTATCACTTTGATTGGAAGCTACCCAATGGAATGAAGAATGAAGAACTTGATATGACTGAGTCATTTGGAATTACTGTAGGAAGAAAACATGATCTATGCTTGATTCCAATTACTCGTCGTACTTAA 1503 0.3852 MELHSHFSNTITFMASFLFLLVLFKLVKTWSCNNSALNLPPGPWTLPLIGNIHQIITSSLPHSRFKNLAMKYGPLMHLKLGEVSYIIVSSPEMAKEIMKTHDLIFCDRPNLLLSTILSYNATDIAFSKYGEYWRQIRKICVIELLSVKRVRSFRYIREEEVSNLVKSIAASEGSVVNLTQKILATTYGITARIAFGKRNIHQEAFKLAIEEALILLGGVCIVDLYPSIKILRRMSRAKTKLEKAQRDLDTILQDIIDDHRREESKDEDLVDVLLNIQQENYHSQHPLTDDNLKAIIQDMFTAGGETSSWTVVWAMSEMVKNPKVMEEAQSEVRRVFDKKGFVDETDFHQLIYLKSIIKETLRLHPSLTLLVPRESRERCQIKGYEIPAKTRVIVNIWAIGRDPRYWVEAESFKPERFLKIPIDFKGTNFEYIPFGAGRRMCPGMSFALPNVELPLAQLLYHFDWKLPNGMKNEELDMTESFGITVGRKHDLCLIPITRRT 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05154 500 Gene3D Cytochrome P450 32 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05154 500 PANTHER OS08G0105600 PROTEIN 64 497 - -
Trre9g05154 500 Coils Coil 234 254 - -
Trre9g05154 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Trre9g05154 500 SUPERFAMILY Cytochrome P450 37 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05154 500 CDD CYP71-like 71 491 - -
Trre9g05154 500 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05154 500 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05154 500 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05154 500 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05154 500 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05154 500 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05154 500 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05154 500 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05154 500 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05154 500 Pfam Cytochrome P450 40 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05154 500 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05154 500 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05154 500 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05154 500 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05154 500 FunFam Cytochrome P450 71D8 32 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05154 Trre-Chr9 56890437 56892074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g05154 10 495 Cytochrome P450 AT3G26300 42.828 5.22e-136 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05154 - - mtr:11442302 790.03