Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05149 ATGCGAGTTTCTACTCTGATGGGACCCAGGAAAGCTAAAAACCAACACACGGCAAGCAAGAAGCAACGCACTTGTGCAGCAAGTTCCTTAGGGCCAGTAGAGGAATTTGATACTCAGAGTGGAAAAGCAAGAAGTCTTGAGGCTGATGACTTAAGGGATCACTTGGCCGGTTTTGCTAAACAATTGAATAAGGTTGTGGCCAAAGATCACAAGATGATGCTTGCTCGAAAATCAATTATTGAGAAGAGGAAAGAAGAACAAGAACAACAATGTCTTGAAATGCAACAAGAGACAGAAAAGATTGCTGAAGAGGCAGCAGAACAAACGCATCTTGCTGAAGTAAGCAATGCTGAAGAGGCAGCCGAACAAATTGCGGAAAAAGAACACGAAGAAGCTAAAGAGCGTAGAAAACTGGAGTTGTTTTTTACTAAACAAACAACTCCGGAAGAGACAAGAAATGAAGAAGAAATGGCAGAAATTAGCTACAACCATGGATTATTTGGAAAAAGCAAAGAGAGAAGAGGCTGCTCTGCTTATCGAAGCGGCATATCAACAACAAGAGGTTGA 567 0.418 MRVSTLMGPRKAKNQHTASKKQRTCAASSLGPVEEFDTQSGKARSLEADDLRDHLAGFAKQLNKVVAKDHKMMLARKSIIEKRKEEQEQQCLEMQQETEKIAEEAAEQTHLAEVSNAEEAAEQIAEKEHEEAKERRKLELFFTKQTTPEETRNEEEMAEISYNHGLFGKSKERRGCSAYRSGISTTRG 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05149 188 Coils Coil 115 137 - -
Trre9g05149 188 MobiDBLite consensus disorder prediction 1 41 - -
Trre9g05149 188 Coils Coil 77 104 - -
Trre9g05149 188 MobiDBLite consensus disorder prediction 108 157 - -
Trre9g05149 188 MobiDBLite consensus disorder prediction 120 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05149 Trre-Chr9 56844223 56846858 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g05149 46 112 Eukaryotic Initiation Factors Gene Family AT4G11420 45.918 4.38e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05149 - K03254 gmx:100803796 65.4698