LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre9g05144	ATGGAGCTTCAGAACCCTTTTTCTAATATAACCTTTATGGCTTCCTTTCTCTTCCTTTTGCTATTGTTCAAAATAGTTAAGAGATGCAGTTGTAACGATTCCACCACCAATTTACCACCAGGACCATGGACACTTCCCTTCATAGGAAACATACACCAAATTATCAGCAACTCACTCCCTCATCACTGTTTAAAAAAATTGGCAGAGAAATATGGACCTTTGATGTACCTAAAACTTGGTGAGGTACCATACATAGTAGTTGGTTCATCAGAAATGGCGAAAGAGATTATGAAAACACATGACCTTAGCTTTTGTGATAGGCCAAACCTTCTTTTGTCCACAATATTTAGTTACAATGCTACTGATATTATATTCTCTATATATGGAGAACATTGGAGGCAACTACGAAAGATATGTGTTATTGAGCTATTAAGTGTAAAGCGTGTCCAATCATTTAGGTCCATAAGAGAAGAAGAGGTGTCAGATCTTGTTAAATCAATATCTGCAAGTGAAGGATCAGTTGTTAATCTTACTCATAAGATTTTTGCAATGACATATGGGATAACAGCTCGTGCGGCTTTTGGTAAAAAGAGCAAACACCAACAAGCGTTCAAATCAGCGTTACAGGAAATAGTATTTTTGTTGGGAGGAAATTGTATTGTTGATTTGTATCCTTCTATTATAATGCTTCAAAGGGTGAGTTGGGCGAAGACGAAAATGGAAAAACTTCACAAAGAGATGGATATGATATTGCAAGACATAATCGACGATCACAAAAGAGTTCACAATGAAGAAAGCAAGGATGAAGATATAGTGGATGCTCTTCTCAAGATTCAACAGGAAAATGATCACTCACAACATCACTTGACTGATGAAAGCATGAAATCAATCATCCAGGACATGTTTGCTGCCGGTACTGAAACATCGTCAGGAGTTGTGTTATGGACGATGTCTGAGATAGTAAAAAATCCAAAGGTAATGGAAGAAGCACAAGCTGAAGTAAGAAGAGTATTTGATAAAAAGGGGTATGTGGACGAGACAAAGATGCACCAATTGATATACTTAAAGTCTGTCATCAAAGAAACATTTAGGTTGCATCCTATTATACCATTGTTAGTTCCAAGAGAAAGTAGGGAGAGGTGTCAAATCAATGGGTATGAGATTCCGGCTAAGACAAGGGTCATTGTCAATGCCTGGGCCATTGGAAGAGATCCAAAATATTGGGTTGAACCCGAGAGTTTTAAACCCGAGAGGTTTGTTGATAGCCTAGTTGATTTCAAAGGCACCGACTTTGAATTCATACCATTTGGTGCCGGAAGAAGAATGTGTCCAGGCATAGCATTTGCCTTGCCCAATATTGAGTTGCCACTTGCTATGTTACTTTACCACTTTGATTGGAAGCTTCCCAACGGAATGAAGAATGAAGATTTAGATATGTCCGAGACATTTGGGATTTCAGTAGGAAGAAAACACGATCTATGCTTGATTCCTATTACTCGTCGTTTTTAA	1509	0.381	MELQNPFSNITFMASFLFLLLLFKIVKRCSCNDSTTNLPPGPWTLPFIGNIHQIISNSLPHHCLKKLAEKYGPLMYLKLGEVPYIVVGSSEMAKEIMKTHDLSFCDRPNLLLSTIFSYNATDIIFSIYGEHWRQLRKICVIELLSVKRVQSFRSIREEEVSDLVKSISASEGSVVNLTHKIFAMTYGITARAAFGKKSKHQQAFKSALQEIVFLLGGNCIVDLYPSIIMLQRVSWAKTKMEKLHKEMDMILQDIIDDHKRVHNEESKDEDIVDALLKIQQENDHSQHHLTDESMKSIIQDMFAAGTETSSGVVLWTMSEIVKNPKVMEEAQAEVRRVFDKKGYVDETKMHQLIYLKSVIKETFRLHPIIPLLVPRESRERCQINGYEIPAKTRVIVNAWAIGRDPKYWVEPESFKPERFVDSLVDFKGTDFEFIPFGAGRRMCPGIAFALPNIELPLAMLLYHFDWKLPNGMKNEDLDMSETFGISVGRKHDLCLIPITRRF	502

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre9g05144	502	PANTHER	CYTOCHROME P450 71B11-RELATED	22	498	-	-
	Trre9g05144	502	SUPERFAMILY	Cytochrome P450	39	500	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Trre9g05144	502	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	436	445	IPR017972	GO:0005506\|GO:0016705
	Trre9g05144	502	PRINTS	P450 superfamily signature	304	321	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Trre9g05144	502	PRINTS	P450 superfamily signature	357	368	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Trre9g05144	502	PRINTS	P450 superfamily signature	434	443	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Trre9g05144	502	PRINTS	P450 superfamily signature	443	454	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Trre9g05144	502	Gene3D	Cytochrome P450	31	500	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Trre9g05144	502	CDD	CYP71-like	70	493	-	-
	Trre9g05144	502	FunFam	Cytochrome P450 71D8	31	497	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre9g05144	Trre-Chr9	56815833	56817424	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre9g05144	17	498	Cytochrome P450	AT1G13110	40.688	3.05e-135	399

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre9g05144	-		-	mtr:11442302	815.453

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