Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05140 ATGGCCAAAGAGATTATGAAAAGAAATGACCTTAACTTTTGTGATAGGCCAAAGCTTCTTTTAGCCACAATACTTAGTTACAATGCTACAGATATTGCATTCTCTACGTATGGAGAACATTGGAGGCAACTACGAAAGATATGCGTTATAGAGCTATTAAGTGAAAAGCGTGTCCAATCATTTAGGTTCATAAGAGAAGAAGAGGGTTTAACACTAGTTAAATCAATTTCTTCAAGTGAAGGATCAATAGTTAATCTTAGTCATATGGTTTCCTCAATGATAAGTGCGATAACAACGCGAGCAGCTTTTGGGAAAAAGAGTAGACATCAACAAGTGTTTAAATCAAAAATGAGTGAAATAATAAACCTATTGGGAGGAGTTTGTATTGCAGATTTGTATCCTTCTATTAAAATGCTTCAAAGGTTGAGTTCGGCGAAGACTAAATTGGAAAAACTTCAGAGAGAGCTTGATAGGATATTGCAAGACATCATCCATGATCATAAAAGCAGTCATAGAGAAGTAAGCAAGGATGGAGATCTAGTTGATGCTCTTCTCAAGATTCAACAAGAAAATGATCAGTCACAAAATCCCTTGACTGATGATGGTATTAAATCAGTCATTCAGGACATGTTTACAGCTGGTACTGAAACATCGTCGGAGGTTATATTATGGGGGATGTCTGAGATGGTAAAGAACCCAAAAGTAATGGAAGTAGCACAAGCCGAGGTAAGAAGAGTGTATGATAAAAAGGGGTATGTAGATGAGACAGAGATGCACCAATTGATATACTTAAAGTCTGTCATCAAAGAAACAATGAGGTTGCATCCTCCTCTACCATTATTGATTCCAAGAGAAAGTAGGGAGAGATGTGAAATTAACGGGTACGATATCCCAGCTAAAACAAGGGTCGCTATCGATTTTTGGGGAATTGGGAGAGATCCTAGATATTGGGTTGAAGCTGAGAGTTTTAAACCCGAGAGATTTATTAATAGCAAATTTAATTTTAAAGGTACAAACTTTGAATACATACCATTTGGTGCTGGAAGGAGGATGTGTCCTGGCATAGCATTTGCCATACCCAGCGTTGAACTACCTCTTGCTCAGTTACTTTACCATTTCGATTGGAAGCTTCCCAATGGAATGATAAATGAAGAACTAGATATGACTGAGTCATTTGAGATTATAATGAAAAGAAAACACGACCTATGCTTAATTCCTTTAATTACTCGTCGTGTTTGA 1239 0.3705 MAKEIMKRNDLNFCDRPKLLLATILSYNATDIAFSTYGEHWRQLRKICVIELLSEKRVQSFRFIREEEGLTLVKSISSSEGSIVNLSHMVSSMISAITTRAAFGKKSRHQQVFKSKMSEIINLLGGVCIADLYPSIKMLQRLSSAKTKLEKLQRELDRILQDIIHDHKSSHREVSKDGDLVDALLKIQQENDQSQNPLTDDGIKSVIQDMFTAGTETSSEVILWGMSEMVKNPKVMEVAQAEVRRVYDKKGYVDETEMHQLIYLKSVIKETMRLHPPLPLLIPRESRERCEINGYDIPAKTRVAIDFWGIGRDPRYWVEAESFKPERFINSKFNFKGTNFEYIPFGAGRRMCPGIAFAIPSVELPLAQLLYHFDWKLPNGMINEELDMTESFEIIMKRKHDLCLIPLITRRV 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05140 412 CDD CYP71-like 1 402 - -
Trre9g05140 412 Pfam Cytochrome P450 1 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05140 412 PRINTS P450 superfamily signature 266 277 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05140 412 PRINTS P450 superfamily signature 343 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05140 412 PRINTS P450 superfamily signature 213 230 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05140 412 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05140 412 PANTHER OS08G0105600 PROTEIN 1 406 - -
Trre9g05140 412 SUPERFAMILY Cytochrome P450 1 405 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05140 412 PRINTS E-class P450 group I signature 1 19 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05140 412 PRINTS E-class P450 group I signature 342 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05140 412 PRINTS E-class P450 group I signature 222 248 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05140 412 PRINTS E-class P450 group I signature 202 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05140 412 PRINTS E-class P450 group I signature 306 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05140 412 PRINTS E-class P450 group I signature 265 283 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05140 412 PRINTS E-class P450 group I signature 352 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05140 412 Gene3D Cytochrome P450 1 410 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g05140 412 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 345 354 IPR017972 GO:0005506|GO:0016705
Trre9g05140 412 FunFam Cytochrome P450 99A2 1 407 - -
Trre9g05140 412 Coils Coil 135 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05140 Trre-Chr9 56803232 56804664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g05140 2 408 Cytochrome P450 AT1G13110 39.952 6.77e-114 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05140 - K23806 mtr:11442302 619.002