Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05138 ATGCAAGCCTTATGGTTGTCCTTGAAAGACAATGTCAAATGTGGTAACAAGCTCACTGATGTAATAAGGATGCCACCAAAATTTGGTAAAGGAAGAAGTAGCTATGTTCTAGGAAAGGAGGACAAATTCAACAATGAGGAAGAAGAAGAAGAAGAGGATAATGTTCCCTTCATGAAAACTCCAGCTAGACTAGCTTTTTCCATGCCGAACAACAAACAAGCACGACTTTATGAGCTTGGTATTGGAGATCCATCAAGAAAAATTGTTGAGATGATATTTCAGAAAGCATGGATGAACACTTCAAAGCCACTAAGAAAGGTTAGAACAGTTCTTAGGGTGAGATACTCACAAGAAGTTCTTGAAAGATTTGAGAATTACAGAGAAAAAGTGAAGAAACAGTATCCAAGACATCCAAGAAGCACAGTAGATGGAAATGAATTGTTGAGATTCTTTGTCACTACAATGAGATGTTTCCCTGTGAAGAAAGTTCATGATCTTTGTCGTGATCCGTCGTGTCGTTTTTGTCAAATAATTCAATTTAATTTCGATGCGGAAAAGGAAGAGATTCAGTTGAGTAACAGAAAAAGTGTAAATGCAAGAGTGAAGAATGTGAAAAGAGTTTCAATAGTTTGCAGAATAATTGCTGGAACTGCAGTGAATGAAGTTGATGGTAAATATGAAGAAGAGTTTGAAAATGATTCAACTAAGCTAGGTGAAATGCAATTTAGCTTAGAAAGATTTGTAGTGAAAAATCCTAGTTCTATTCTTCCTTGTTTTGTCATAATTTTCAGCTAG 795 0.3572 MQALWLSLKDNVKCGNKLTDVIRMPPKFGKGRSSYVLGKEDKFNNEEEEEEEDNVPFMKTPARLAFSMPNNKQARLYELGIGDPSRKIVEMIFQKAWMNTSKPLRKVRTVLRVRYSQEVLERFENYREKVKKQYPRHPRSTVDGNELLRFFVTTMRCFPVKKVHDLCRDPSCRFCQIIQFNFDAEKEEIQLSNRKSVNARVKNVKRVSIVCRIIAGTAVNEVDGKYEEEFENDSTKLGEMQFSLERFVVKNPSSILPCFVIIFS 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05138 264 Gene3D - 74 264 - -
Trre9g05138 264 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 72 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05138 Trre-Chr9 56791690 56792826 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g05138 57 262 C2H2 Transcription Factor Family AT5G54630 33.617 1.54e-28 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05138 - - tpra:123921169 488.034