Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05132 ATGTTATGTTCAGGAGGTGAGTTATCATCATCAGAGTCTCATTCTTTCTATAGTTTCCTAAAAGCTATTGATCACAATAATGTACTTAACATTAGCAAGATATCATATCCATGTTTGATCAATGGTGTAAGATGCAATTCAAATGCTACAAATATTGTAGAGATAAGGCTTGATAACATGAACCTTAGTGGCATATTTGATGCATATTCACTATGTAGACTCCAAAAGCTAAAAGTGGTTAGTTTAGCTAACAATAATATCAAAGGGACTATTTCAAGCTCAATTTTGCATTGTAGAAGATTGGTACATTTAAATGTAACAAATAATCAATTGAGTGGTAGGTTACCAAAGTCTTTAAGAAGATTGAAATATCTTAAGAACTTAGATGTATCTAAGAATAATTTTTCTACTAATTATATGGCTCAAATTAGTAAGTTAGAGAGCATAAGTGATTTAGATTATACAATACAACCAACACCAAGTCTTTTAAGTTCCAATAACACATCTAAAACACCAAAGAGACCATGGTATGAAAATATTGAAATCTTGTTAGGGTTGGGTTTGGGAGTTGGATTGCTTTTATCATCACTATACTTTATGATAAAGAAATCTTCCAAGTTAATAGAAGAGATTGAGGTAAAGAAAAACCATCTTGATTCTCCTATAAAAAAGCCTACAACTCATGAGGTGAAATTAAAAGGAGGAGATACTTGTAATTCAGAACTTGTGTTCTTTGTTGAAGATCATGAGAGGTTCAAACTTGAGGATCTATTAAGAGCTAAAGCTGATTTGAGAAGTGAAAATTTTTGGAGTAGTCTTTTCAAGGTGAAACTTGAGAATAATGTTGAATATGCTGTCAAAAGATTGAAGAATTTGCAGGTATCTTGTGATGAATTTGAAGAAACATTGAGGAAGATAAGTAAAGTGAAACATCAAAATATTCTCCCCCTTGTTGGTTATCGTTCTACCAATGAAGAAAAACTTATCATTTACAAATATCAAAGCAATGGAAGTTTGCTCAATCTCTTAAATGATTATATAGCAAGGAGAAAAGATTTTCCATGGAAACTTCGTCTCAATATAGCATGCGGAATCGCAAGGGGGTTAGCATTCATTTATAAGAAGTTAGATGAAGGGGAGGTCAATATTATACCTCATGGAAACATCAAGCTATCAAATATCCTTCTAAATGACAAAAATGAAGCACTAATAGGTGAACATGGTTTATCGAAATTCTTTGAACCAAATAGAGGTACTGCTCTATTTTCCTCTGACGGATACACAGCACCTGAAAAGAGTTTAACCGAAAAAGGCGATGTATATAGCTTCGGAGTGATTCTACTAGAACTACTAACAGGACAAAGCATAGAAGTTAGTAGAATAGACCTTGTTAGATGGGTGAGGTCAATGGTGAGAGAAGAATGGACAGGTGAAGTGTTTGACAAGGAAGTTAGAGAAAATGATCATCAAGGTGCATTTTCATTGTTGAATATTGCTCTCTTGTGTGTGTCGCGTTCTCAAGAAAATAGGCCAAATGTTGAAGATATTTTGAACACAATTGAAGGTGTGATGAATGCACATGAACAACAACAACAGATAGAACTTTCTGCTTCAAAATGTTGTTCTAATGGAACCAATCAAGAATGTTGTTCACTTCATCAAATCATACCTGATACATGGGATTCTCCTGGATCAAATTATTGA 1704 0.3333 MLCSGGELSSSESHSFYSFLKAIDHNNVLNISKISYPCLINGVRCNSNATNIVEIRLDNMNLSGIFDAYSLCRLQKLKVVSLANNNIKGTISSSILHCRRLVHLNVTNNQLSGRLPKSLRRLKYLKNLDVSKNNFSTNYMAQISKLESISDLDYTIQPTPSLLSSNNTSKTPKRPWYENIEILLGLGLGVGLLLSSLYFMIKKSSKLIEEIEVKKNHLDSPIKKPTTHEVKLKGGDTCNSELVFFVEDHERFKLEDLLRAKADLRSENFWSSLFKVKLENNVEYAVKRLKNLQVSCDEFEETLRKISKVKHQNILPLVGYRSTNEEKLIIYKYQSNGSLLNLLNDYIARRKDFPWKLRLNIACGIARGLAFIYKKLDEGEVNIIPHGNIKLSNILLNDKNEALIGEHGLSKFFEPNRGTALFSSDGYTAPEKSLTEKGDVYSFGVILLELLTGQSIEVSRIDLVRWVRSMVREEWTGEVFDKEVRENDHQGAFSLLNIALLCVSRSQENRPNVEDILNTIEGVMNAHEQQQQIELSASKCCSNGTNQECCSLHQIIPDTWDSPGSNY 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05132 567 Gene3D Phosphorylase Kinase; domain 1 226 333 - -
Trre9g05132 567 Gene3D Ribonuclease Inhibitor 12 182 IPR032675 -
Trre9g05132 567 SUPERFAMILY Protein kinase-like (PK-like) 271 520 IPR011009 -
Trre9g05132 567 Pfam Protein tyrosine and serine/threonine kinase 277 519 IPR001245 GO:0004672|GO:0006468
Trre9g05132 567 Gene3D Transferase(Phosphotransferase) domain 1 335 547 - -
Trre9g05132 567 SUPERFAMILY L domain-like 36 184 - -
Trre9g05132 567 PANTHER OS05G0588300 PROTEIN 11 154 - -
Trre9g05132 567 Coils Coil 289 309 - -
Trre9g05132 567 ProSiteProfiles Protein kinase domain profile. 259 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05132 Trre-Chr9 56757484 56759558 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g05132 2 523 Receptor kinase-like Gene Family AT5G53320 31.634 3.92e-73 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre9g05132 PK_Tyr_Ser-Thr 1.9e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05132 - - gmx:100807491 734.176