Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05131 ATGAAGAACACAATAGATTTTTCAATGGTTCAAATTCTAAGGAGGCTATTTCACTTTTCTATCATAACTATTTTCTCTATGATCATGTTATGTTCAGGAGGTGAGTTATCATCATCAGAGTCTCATTCTTTCTATAGTTTCCTAAAAGCTATTGATCACAATAATGTACTTAACATTAGCAAGATATCATATCCATGTTTGATCAATGGTGTAAGATGCAATTCAAATGCTACAAATATTGTAGAGATAAGGCTTGATAACATGAACCTTAGTGGCATATTTGATGCATATTCACTATGTAGACTCCAAAAGCTAAAAGTGGTTAGTTTAGCTAACAATAATATCAAAGGGACTATTTCAAGCTCAATTTTGCATTGTAGAAGATTGGTACATTTAAATGTAACAAATAATCAATTGAGTGGTAGGTTACCAAAGTCTTTAAGAAGATTGAAATATCTTAAGAACTTAGATGTATCTAAGAATAATTTTTCTACTAATTATATGGCTCAAATTAGTAAGTTAGAGAGCATAAGTGATTTAGATTATACAATACAACCAACACCAAGTCTTTTAAGTTCCAATAACACATCTAAAACACCAAAGAGACCATGGTATGAAAATATTGAAATCTTGTTAGGGTTGGGTTTGGGAGTTGGATTGCTTTTATCATCACTATACTTTATGATAAAGAAATCTTCCAAGTTAATAGAAGAGATTGAGGTAAAGAAAAACCATCTTGATTCTCCTATAAAAAAGCCTACAACTCATGAGGTGAAATTAAAAGGAGGAGATACTTGTAATTCAGAACTTGTGTTCTTTGTTGAAGATCATGAGAGGTTCAAACTTGAGGATCTATTAAGAGCTAAAGCTGATTTGAGAAGTGAAAATTTTTGGAGTAGTCTTTTCAAGGTGAAACTTGAGAATAATGTTGAATATGCTGTCAAAAGATTGAAGAATTTGCAGGTATCTTGTGATGAATTTGAAGAAACATTGAGGAAGATAAGTAAAGTGAAACATCAAAATATTCTCCCCCTTGTTGGTTATCGTTCTACCAATGAAGAAAAACTTATCATTTACAAATATCAAAGCAATGGAAGTTTGCTCAATCTCTTAAATGATTATATAGCAAGGAGAAAAGATTTTCCATGGAAACTTCGTCTCAATATAGCATGCGGAATCGCAAGGGGGTTAGCATTCATTTATAAGAAGTTAGATGAAGGGGAGGTCAATATTATACCTCATGGAAACATCAAGCTATCAAATATCCTTCTAAATGACAAAAATGAAGCACTAATAGGTGAACATGGTTTATCGAAATTCTTTGAACCAAATAGAGGTACTGCTCTATTTTCCTCTGACGGATACACAGCACCTGAAAAGAGTTTAACCGAAAAAGGCGATGTATATAGCTTCGGAGTGATTCTACTAGAACTACTAACAGGACAAAGCATAGAAGTTAGTAGAATAGACCTTGTTAGATGGGTGAGGTCAATGGTGAGAGAAGAATGGACAGGTGAAGTGTTTGACAAGGAAGTTAGAGAAAATGATCATCAAGGTGCATTTTCATTGTTGAATATTGCTCTCTTGTGTGTGTCGCGTTCTCAAGAAAATAGGCCAAATGTTGAAGATATTTTGAACACAATTGAAGGTGTGATGAATGCACATGAACAACAACAACAGATAGAACTTTCTGCTTCAAAATGTTGTTCTAATGGAACCAATCAAGAATGTTGTTCACTTCATCAAATCATACCTGATACATGGGATTCTCCTGGATCAAATTATTGA 1788 0.3311 MKNTIDFSMVQILRRLFHFSIITIFSMIMLCSGGELSSSESHSFYSFLKAIDHNNVLNISKISYPCLINGVRCNSNATNIVEIRLDNMNLSGIFDAYSLCRLQKLKVVSLANNNIKGTISSSILHCRRLVHLNVTNNQLSGRLPKSLRRLKYLKNLDVSKNNFSTNYMAQISKLESISDLDYTIQPTPSLLSSNNTSKTPKRPWYENIEILLGLGLGVGLLLSSLYFMIKKSSKLIEEIEVKKNHLDSPIKKPTTHEVKLKGGDTCNSELVFFVEDHERFKLEDLLRAKADLRSENFWSSLFKVKLENNVEYAVKRLKNLQVSCDEFEETLRKISKVKHQNILPLVGYRSTNEEKLIIYKYQSNGSLLNLLNDYIARRKDFPWKLRLNIACGIARGLAFIYKKLDEGEVNIIPHGNIKLSNILLNDKNEALIGEHGLSKFFEPNRGTALFSSDGYTAPEKSLTEKGDVYSFGVILLELLTGQSIEVSRIDLVRWVRSMVREEWTGEVFDKEVRENDHQGAFSLLNIALLCVSRSQENRPNVEDILNTIEGVMNAHEQQQQIELSASKCCSNGTNQECCSLHQIIPDTWDSPGSNY 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05131 595 ProSiteProfiles Protein kinase domain profile. 287 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g05131 595 SUPERFAMILY L domain-like 64 211 - -
Trre9g05131 595 SUPERFAMILY Protein kinase-like (PK-like) 299 548 IPR011009 -
Trre9g05131 595 Gene3D Ribonuclease Inhibitor 40 210 IPR032675 -
Trre9g05131 595 Gene3D Transferase(Phosphotransferase) domain 1 363 575 - -
Trre9g05131 595 PANTHER OS05G0588300 PROTEIN 23 182 - -
Trre9g05131 595 Gene3D Phosphorylase Kinase; domain 1 254 361 - -
Trre9g05131 595 Coils Coil 317 337 - -
Trre9g05131 595 Pfam Protein tyrosine and serine/threonine kinase 305 547 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05131 Trre-Chr9 56757484 56759642 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g05131 21 549 Receptor kinase-like Gene Family AT5G53320 31.597 1.49e-73 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre9g05131 PK_Tyr_Ser-Thr 2.1e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05131 - - gmx:100807491 742.651