Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05115 ATGGTAAAGAAATCTTCCAAATTAATTGAAGAGATTGAGGTGAAGAAAAACCATCTTGATTCTCCTATAAAAAAGCCTACAATTCAAGAGGTGAAATTAAAAGGAGATAATTGTAATTCAGAACTTGTGTTCTTTGTTGAAGATCATGAGAGGTTCAAACTTGAGGATTTATTAAGAGCTAAAGCTGATTTGAGAAGTGAAAATTTTTGGAGTAGTCTTTTCAAGGTGAAACTTGAGAATAAAGTTGAATATGCTGTCAAAAGATTGAAGAATTTGCAGGTATCTTGTGATGAATTTGGAGAAACATTGAGGAAGATAAGTAAAGTTAAACATCAAAATATTCTCCCCCTTGTTGGTTATCGTTCTACCAATGAAGAAAAACTTATCATTTACAAATATCAAAGCAATGGAAGTTTGCTCAACCTCTTAAATGATTATATAGCAAGGAGAAAAGATTTTCCATGGAAACTTCGTCTCAATATAGCATGCGGAATCGCAAGGGGGTTAGCATTCATTTATAAGAAGTTGGATGAAGGGGAGGTCAATATTATACCTCATGGACACATCAAGCTATCAAATATCCTTCTAAATGACAAAAATGAAGCACTAATAGGTGAATATGGTTTATCGAAATTCTTTGAACCAAATAGAGGTACTGCTCTATTTTCCTCTGACGGATACACAGCTCCTGAAAAGAGTTTAACCGAAAAAGGTGATGTATATAGCTTCGGAGTGATTCTACTAGAACTACTAACAGGACAAAGCATAGAAGTTAGTAGAATAGACCTTGTTAGATGGGTGAGGTCAATGGTGAGAGAAGAATGGACAGGTGAAGTGTTTGACAAGGAAGTTAGAGAAAATGATCATCAAGGTGCATTTTCATTGTTGAATATTGCTCTCTTGTGTGTGTCGCGTTCTCAAGAAAATAGGCCAAATGTTGAAGATATTTTGAACACAATTGAAGGTGTGATGAATGCACATGAACAACAACAACAGATAGAACTTTCTGCTTCAAAATGTTGTTCTAATGGAACCAATCAAGAATGTTGTTCACTTCATCAAATCATACCTGATACATGGGATTCTCCTGGATCAAATTATTGA 1104 0.346 MVKKSSKLIEEIEVKKNHLDSPIKKPTIQEVKLKGDNCNSELVFFVEDHERFKLEDLLRAKADLRSENFWSSLFKVKLENKVEYAVKRLKNLQVSCDEFGETLRKISKVKHQNILPLVGYRSTNEEKLIIYKYQSNGSLLNLLNDYIARRKDFPWKLRLNIACGIARGLAFIYKKLDEGEVNIIPHGHIKLSNILLNDKNEALIGEYGLSKFFEPNRGTALFSSDGYTAPEKSLTEKGDVYSFGVILLELLTGQSIEVSRIDLVRWVRSMVREEWTGEVFDKEVRENDHQGAFSLLNIALLCVSRSQENRPNVEDILNTIEGVMNAHEQQQQIELSASKCCSNGTNQECCSLHQIIPDTWDSPGSNY 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05115 367 SUPERFAMILY Protein kinase-like (PK-like) 72 320 IPR011009 -
Trre9g05115 367 Pfam Protein tyrosine and serine/threonine kinase 77 319 IPR001245 GO:0004672|GO:0006468
Trre9g05115 367 Gene3D Transferase(Phosphotransferase) domain 1 135 347 - -
Trre9g05115 367 ProSiteProfiles Protein kinase domain profile. 59 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g05115 367 PANTHER OS05G0588300 PROTEIN 35 329 - -
Trre9g05115 367 Gene3D Phosphorylase Kinase; domain 1 25 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05115 Trre-Chr9 56669308 56670783 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g05115 41 347 Receptor kinase-like Gene Family AT1G68400 38.080 8.70e-56 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre9g05115 PK_Tyr_Ser-Thr 8.8e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05115 - - tpra:123920674 660.603