Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05102 ATGGTAAAGAAATCTTCCAAATTAATTGAAGAGATTGAGGTAAAGAAAAACCATCTTGATTTTCCTATAAAAAAGCCTACAACTCATGAGGTGAAATTAAAAGGAGGAGATAATTGTAATTCAGAACTTGTGTTCTTTGTTGAAGATCATGAGAGGTTCAAACTTGAGGATTTATTAAGAGCTAAAGCTGATTTGAGAAGTGAAATTTTTTGGAGTAGTCTTTTCAAGGTGAAACTTGAGAATAATGTTGAATATGCTGTCAAAAGATTGAAGAATTTGCAGGTATCTTGTGATGAATTTGGAGAAACATTGAGGAAGATAAGTAAAGTTAAACATCAAAATATTCTCCCCCTTGTTGGTTATCGTTCTACCAATGAAGAAAAACTTATCATTTACAAATATCCAAGCAATGGAAGTTTGCTCAATCTCTTAAATGATTATATAGCAAGGAGAAAAGATTTCCCATGGAAACTTCGTCTCAATATAGCATGCGGAATCGCAAGGGGATTAGCATTCATTTATAAGAAGTTGGATGAAGGGGAGGCCAATATTATCCCTCATGGAAATATCAAGCTATCAAATATCCTCCATGACAAAAATAAAGCACTAATAGGTGAACATGGTTTATCGAAATTCTTTGAACCAAATAGAGGTACTAATCTCTTTTCCTCTGACGGATACACAGCACCTGAAAAGAGTTTAACCGAAAAAGGCGATGTATATAGCTTCGGATTTATTCTACTAGAACTACTAACAGGACAAAGCATAGAAGTTAGTAGAATAGACCTTGTTAGATGGGTGAGGTCAATGGTGAGAGAAGAATGGACAGGTGAAGTGTTTGACAAGGAAGTTAGAGAAAATGATCATCAAGGTGCATTTTCATTGTTGAATATTGCTCTCTTGTGTGTGTCGCGTTCTCAAGAAAATAGGCCAAATGTTGAAGAAATTTTGAACACAATTGAAGGTGTGATGAATGCACATGAACAACAACAACAACAGATGGAACTTTCTGCTTCAAAATGTTGTTCTAATGGAACCAATCAAGAATGTTGTTCACTTCATCAAATCATACCTGATACATGGGATTCTTCTGGATCAAATTATTGA 1107 0.346 MVKKSSKLIEEIEVKKNHLDFPIKKPTTHEVKLKGGDNCNSELVFFVEDHERFKLEDLLRAKADLRSEIFWSSLFKVKLENNVEYAVKRLKNLQVSCDEFGETLRKISKVKHQNILPLVGYRSTNEEKLIIYKYPSNGSLLNLLNDYIARRKDFPWKLRLNIACGIARGLAFIYKKLDEGEANIIPHGNIKLSNILHDKNKALIGEHGLSKFFEPNRGTNLFSSDGYTAPEKSLTEKGDVYSFGFILLELLTGQSIEVSRIDLVRWVRSMVREEWTGEVFDKEVRENDHQGAFSLLNIALLCVSRSQENRPNVEEILNTIEGVMNAHEQQQQQMELSASKCCSNGTNQECCSLHQIIPDTWDSSGSNY 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05102 368 SUPERFAMILY Protein kinase-like (PK-like) 73 320 IPR011009 -
Trre9g05102 368 Gene3D Phosphorylase Kinase; domain 1 27 134 - -
Trre9g05102 368 Gene3D Transferase(Phosphotransferase) domain 1 136 349 - -
Trre9g05102 368 Pfam Protein kinase domain 76 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g05102 368 Coils Coil 313 333 - -
Trre9g05102 368 ProSiteProfiles Protein kinase domain profile. 59 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g05102 368 PANTHER OS05G0588300 PROTEIN 37 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05102 Trre-Chr9 56569134 56570835 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g05102 13 321 Receptor kinase-like Gene Family AT5G53320 37.500 5.24e-54 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre9g05102 Pkinase 1.6e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05102 - - tpra:123920674 659.062