Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05062 ATGGGTTTCGTTGTTACCTCGCTAATCTTCCTTCTCATCGGAATTATCGCGTCTTTTTCTACAACTATTTGCTTCAACAAAGGATCTTCTGCTAATCTTTTTCACCTAACTTTGGTCCTTACTTCAACAATATGCTGCTGGATGATGTGGGCGATCGTATATCTGGCACAGATGAATCCACTCATAGTTCCTATCTTGAGTGGTGAATAG 210 0.4048 MGFVVTSLIFLLIGIIASFSTTICFNKGSSANLFHLTLVLTSTICCWMMWAIVYLAQMNPLIVPILSGE 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05062 69 Pfam ATP synthase subunit H 3 67 IPR008389 GO:0033179|GO:0046961|GO:1902600
Trre9g05062 69 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT H 1 68 IPR008389 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05062 Trre-Chr9 56302031 56303690 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g05062 1 67 Primary Pumps ATPases(2) AT4G26710 79.104 5.89e-35 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05062 K02153 - han:110942100 118.242