Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05060 ATGGCTGCTCTTCTTCCTTCTTCCCTCACAAACCCAAATAAGCTTCTCTCATATTCTTCCCATTTCCACAATGCATCATTATCCACTTCACCTTCTTCTGTTTCTCTTCACCCCAAAACGCAACGTTTCACTCGTCGTTTTGGGTCTGTTAGATGTTCTTTAGCTTATGTTGATAATGCTAAGATTAAGGTCGTTGGAATTGGGGGTGGTGGTAACAATGCTGTTAACCGCATGATTGGTAGTGGTTTACAAGGTGTAGACTTCTATGCAATAAATACTGATGCTCAAGCGCTATTGCATTCGGCTGCGGAGAATCCTATTAAAATTGGAGAGCTTCTGACTCGTGGATTAGGTACTGGTGGGAATCCACTTTTGGGCGAACAAGCTGCAGAGGAATCAAAAGAGGCTATTGCTAATGCCCTTAAAGGATCGGATTTGGTGTTTATAACAGCTGGGATGGGTGGGGGTACAGGGTCCGGTGCTGCCCCAGTTGTGGCCCAAATATCAAAAGAGGCTGGTTACTTGACTGTTGGTGTTGTTACCTATCCTTTCAGTTTTGAAGGACGTAAAAGATCCTTGCAGGCACTTGAAGCTATTGAAAAACTTCAGAAAAATGTCGATACACTTATTGTGATTCCAAACGACCGGCTGCTTGACATAGCTGATGAGCAGATGCCACTTCAAGATGCTTTTCGTCTTGCAGATGATGTTTTACGACAAGGAGTTCAGGGAATTTCAGACATTATAACAATACCTGGACTTGTGAATGTGGATTTTGCTGATGTAAAAGCTGTGATGAAAGACTCTGGTACTGCAATGCTTGGAGTAGGTGTTTCATCCGGTAAAAACCGAGCAGAAGAAGCAGCAGAACAGGCTACTTTGGCTCCTTTAATTGGATCATCTATTCAATCAGCCACTGGTGTAGTGTATAATATTACTGGAGGAAAGGACATTACCTTGCAGGAAGTCAACAGGGTATCTCAGGTTGTGACTAGTTTGGCTGATCCTTCTGCCAATATTATATTTGGAGCTGTTGTTGATGATCGTTACACCGGAGAGATTCATGTCACTATCATTGCCACTGGCTTTTCACAGTCTTTTCAGAAGAAGCTACTAACAGATCCAAGGGCTGCAAAACTTCTTGACAAAGTGGCCGAGGGAAAAGAAAGTAAGACAGTGCCCTCTCCCCTCAAGTCCTCAAACTTATCTTCCAAAGTTGAATCTAGAGCACCATCCCCACGAAAACTCTTTTTTTAG 1257 0.4312 MAALLPSSLTNPNKLLSYSSHFHNASLSTSPSSVSLHPKTQRFTRRFGSVRCSLAYVDNAKIKVVGIGGGGNNAVNRMIGSGLQGVDFYAINTDAQALLHSAAENPIKIGELLTRGLGTGGNPLLGEQAAEESKEAIANALKGSDLVFITAGMGGGTGSGAAPVVAQISKEAGYLTVGVVTYPFSFEGRKRSLQALEAIEKLQKNVDTLIVIPNDRLLDIADEQMPLQDAFRLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSGKNRAEEAAEQATLAPLIGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYTGEIHVTIIATGFSQSFQKKLLTDPRAAKLLDKVAEGKESKTVPSPLKSSNLSSKVESRAPSPRKLFF 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05060 418 MobiDBLite consensus disorder prediction 393 408 - -
Trre9g05060 418 Gene3D Tubulin/FtsZ, GTPase domain 55 268 IPR036525 -
Trre9g05060 418 Pfam Tubulin/FtsZ family, GTPase domain 61 221 IPR003008 GO:0005525
Trre9g05060 418 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 154 160 IPR017975 GO:0005525|GO:0005874|GO:0007017
Trre9g05060 418 SUPERFAMILY Tubulin nucleotide-binding domain-like 60 256 IPR036525 -
Trre9g05060 418 PRINTS Cell division protein FtsZ signature 260 281 IPR003008 GO:0005525
Trre9g05060 418 PRINTS Cell division protein FtsZ signature 174 195 IPR003008 GO:0005525
Trre9g05060 418 PRINTS Cell division protein FtsZ signature 146 166 IPR003008 GO:0005525
Trre9g05060 418 PRINTS Cell division protein FtsZ signature 237 259 IPR003008 GO:0005525
Trre9g05060 418 FunFam Cell division protein FtsZ 1, chloroplastic 226 363 - -
Trre9g05060 418 FunFam Cell division protein FtsZ 1, chloroplastic 54 268 - -
Trre9g05060 418 NCBIfam cell division protein FtsZ 58 372 IPR000158 GO:0003924|GO:0005525
Trre9g05060 418 Hamap Cell division protein FtsZ [ftsZ]. 57 387 IPR000158 GO:0003924|GO:0005525
Trre9g05060 418 SMART Tubulin_4 61 253 IPR003008 GO:0005525
Trre9g05060 418 ProSitePatterns FtsZ protein signature 1. 92 126 IPR020805 GO:0005525
Trre9g05060 418 SUPERFAMILY Tubulin C-terminal domain-like 255 371 IPR008280 -
Trre9g05060 418 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 55 376 IPR045061 GO:0003924|GO:0005525
Trre9g05060 418 Pfam FtsZ family, C-terminal domain 270 363 IPR024757 -
Trre9g05060 418 Gene3D - 269 375 IPR037103 -
Trre9g05060 418 ProSitePatterns FtsZ protein signature 2. 145 166 IPR020805 GO:0005525
Trre9g05060 418 CDD FtsZ_type1 74 362 IPR000158 GO:0003924|GO:0005525
Trre9g05060 418 SMART Tubulin_C_4 255 372 IPR018316 -
Trre9g05060 418 MobiDBLite consensus disorder prediction 385 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05060 Trre-Chr9 56294056 56296472 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g05060 149 357 PP2C-type Phosphatase Gene Family AT1G75010 21.461 9.90e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05060 K03531 - gmx:100808722 672.544