Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g05041 ATGGCCACCATCGGAATCGACCTCGGCACTACCTACTCCTGCGTCGGAGTCTGGCAGAACGAAGCTGTCAAAATCATCCCCAACGACCAGGGCAACCGTACCACCCCTTCTTACGTCGCTTTCACTGATTCCGACCGCTTCATCGGCGACGCCGCAAAAGACCAAGTCACCTGGAACCCCCTCAACACCGTCTTCGATGCGAAGCGTTTGATTGGAAGGAGATTCTCTGATGCTACCGTTCAGAGTGACATGAAGCTATGGCCATTCAAGGTTATTGCTGGTACTGCTGACAAGCCAATGATTGTTGTTAACTACAAGAATGAAGAGAAGCACTTCACTGCTGAGGAGATTTCATCAATGGTCCTCATCAAGATGCGTCAGACCGCCGAGGCTTACCTTGGCTGTACTGTCAAAAAAGCTGTTGTCACTGTCCCAGCTTACTTCAATGACTCTCAGCGTCAGGCCACTAAGGATGCTGGAGTCATCGCGGGACTTAATGTTATTCGTATTATCAATGAACCTACTGCTGCTTCACTTGCCTATGGCCTTGGCATGGGAAACACTAGTGATGATGATGAGAAGGATGTGCTGATTTTTGACCTTGGTGGTGGTACTTTTGATGTTTCTCTTCTAACCATTGACTCCAGTGTCTTTGATGTTAAGGCCACTGCCGGAGACACCCATCTTGGAGGTGAGGACTTTGATAATAGGATGGTTAACCATTTTGTTGACGAGTTCAAGAGAAAGCACAAGAAGGACATTAGTGGGAACCCGAGGGCTTTAAGAAGGTTGAGGAATGCATGTGAAAAGGCAAAGAGGATTCTCTCGTCTACGAAACAGACAACCATTGCAATTGACTCATTGTATGAAGGTGTTGACTTGTACACCACAATCACTCGTGACAAGTTTGAAGAGCTCAACATGGATCTCTTCAGGAAGTGCATGGAGACTGTTGACAAGTGTTTGACGGATGCTGAGATGGACAAGGGGAGTGTCCATGATGTTGTTCTTGTTGGTGGGTCTACTAGGATCCCAAAGGTGCAGTCACTGTTGCAGGGTTTCTTCAACGGAAAGGAGCTCTGCAAGAGCATCAATCCGGATGAGGCTGTTGCTTATGGAGCTACTGTTCAGGCTGCTAAATTGAGTGGTGAGGACAATAAGGAGATTAAGGATCTTGTGTTGCTTGATGTCACTCCCCTTTCACTTGGTGTGGAAACTGCTGGTGGTGTCATGACTGTCCTGATTCCAAACAACTGTACCATTCCTGCCAGGAAGGAGCAGATTTTCTCAACCTACTCAGATAACCAGCCTGGTGTGTCCATCAAGGTGTACGAGGGTGAGAGAAGTAGGAGCATGGACAATAACTTGTTGGGTAAATTCGAGCTTTGTGGCATTCCTCTTGCTCCAAGGGGTGTTCCTAAGATCAATGTTTGCTTTCAAATTGATAGCAATGGTATCTTGGATGTCTCTGCTGAGGACAAGACTACAGGGAAGAAGAACAAGATCACTATCACCAATGACAAGGGCAGGCTCTCGAAGGAGGAGATTGAGAAGATGGTGCAGGAGGCGAAGAAGTCTGAAGATGAGGAACACAAGAAGGTCGATGCCAAGTATGCCTTGGAAAATGTGATGCAAGAGGTGGAGAAGTACGATTCTACAAAAGATTCTCCATACCTATACTTGGAGAGGCAAGTGGAACATGATACTTGCCATCAGGTTACATTACCAACCCCAAGTTTACACCCCTTCCCTTCCGAAAACTTTGGGTATTATTTCAACTCTACAAAAAAGGCTTCGCAAAAAATTATAGATGCACTAAAAGATGATAAATACTATGTAATTGGATTGCATGGAAAGAAGGGCTCTGGTAAAACATCGTTAGTGAAAGCTGAGATGAATGGGTATGAAAATATTTTTCAAAGAGTTATATTTCCCACAGTTTCCAATAACCAAGATGCCAAGAGCATTCAGGAGGGAATTGCTAGCTCGCTGAATGTGCATTTTGAAAGAGATGACAGTGATGGAATGAGAGCAGTGAAAATAATTAAGGCATTAGAAAGGAAGGATAGGACTATTCTGGTTATTTTGGATAATTTTCCGACAAAGTCTCAACCACAGGAATTAGGTATTCCTTTTAATAGCAGACAATGCAAGGTTCTTTTAACCGCACGTGACGAAGCAGACTGTGTCTTCATGAGATGTGACCATTCTATTTCTCTGGATCCCTTATCTAATGAGGAAGCTTTGACACTGCTACAAAAACTTTCTGGTGTTAACTCTCAATCTTCTCTATTTCAAGTGGCACAGGAAGTTGCTTCTAAATGCAATGGCTTACCTGGATTGATTGAAAAGGTGGCGACTTCCTTGAAAAATAAATCCCTGGAAAATTGGAAACAATCATTAGTCAGTCTAAGCCACTCAACTGCCCGCTATCAGATTTTTATCAGTTTTAGAGGAGGTGATACTCGACATGTTTTTACAAACCACCTCCATTATGCTTTGTGCCAGAAGGGGTTCGTGACCTTCAAAGATGATGAATCATTGGAGGGTGGGGTCCCAATTGAGAAACTTCTTGACGACATTGAAGAATCAAGATTTGCAATTGTTATTTTATCCAAAAATTATGCAGACTCTGAATGGTGTCTCAAAGAACTGGTCAAAATTCTTGAGTGTAAGGATAAGGAAGGTAAGAACCAATTAGTTTTGCCAATCTTCTATGAAGTACCGCCCTCAGACGTAAGGCATGTACGGAATAGTTATGCTGATGCCATGGCCAAACATGTAAACAATGGAAAAGATTCATATATAGTTAAAACATGGAAGAAGGCTTTATATGATATTTGTACGCTGACGGGATATGAAAAGCTTCATGACTGGTAA 2880 0.4344 MATIGIDLGTTYSCVGVWQNEAVKIIPNDQGNRTTPSYVAFTDSDRFIGDAAKDQVTWNPLNTVFDAKRLIGRRFSDATVQSDMKLWPFKVIAGTADKPMIVVNYKNEEKHFTAEEISSMVLIKMRQTAEAYLGCTVKKAVVTVPAYFNDSQRQATKDAGVIAGLNVIRIINEPTAASLAYGLGMGNTSDDDEKDVLIFDLGGGTFDVSLLTIDSSVFDVKATAGDTHLGGEDFDNRMVNHFVDEFKRKHKKDISGNPRALRRLRNACEKAKRILSSTKQTTIAIDSLYEGVDLYTTITRDKFEELNMDLFRKCMETVDKCLTDAEMDKGSVHDVVLVGGSTRIPKVQSLLQGFFNGKELCKSINPDEAVAYGATVQAAKLSGEDNKEIKDLVLLDVTPLSLGVETAGGVMTVLIPNNCTIPARKEQIFSTYSDNQPGVSIKVYEGERSRSMDNNLLGKFELCGIPLAPRGVPKINVCFQIDSNGILDVSAEDKTTGKKNKITITNDKGRLSKEEIEKMVQEAKKSEDEEHKKVDAKYALENVMQEVEKYDSTKDSPYLYLERQVEHDTCHQVTLPTPSLHPFPSENFGYYFNSTKKASQKIIDALKDDKYYVIGLHGKKGSGKTSLVKAEMNGYENIFQRVIFPTVSNNQDAKSIQEGIASSLNVHFERDDSDGMRAVKIIKALERKDRTILVILDNFPTKSQPQELGIPFNSRQCKVLLTARDEADCVFMRCDHSISLDPLSNEEALTLLQKLSGVNSQSSLFQVAQEVASKCNGLPGLIEKVATSLKNKSLENWKQSLVSLSHSTARYQIFISFRGGDTRHVFTNHLHYALCQKGFVTFKDDESLEGGVPIEKLLDDIEESRFAIVILSKNYADSEWCLKELVKILECKDKEGKNQLVLPIFYEVPPSDVRHVRNSYADAMAKHVNNGKDSYIVKTWKKALYDICTLTGYEKLHDW 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g05041 959 ProSitePatterns Heat shock hsp70 proteins family signature 2. 198 211 IPR018181 -
Trre9g05041 959 Pfam NB-ARC domain 598 810 IPR002182 GO:0043531
Trre9g05041 959 FunFam Disease resistance protein (TIR-NBS-LRR class) 807 959 - -
Trre9g05041 959 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 378 556 IPR029047 -
Trre9g05041 959 Gene3D - 4 377 - -
Trre9g05041 959 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 595 804 IPR027417 -
Trre9g05041 959 Pfam TIR domain 811 946 IPR000157 GO:0007165
Trre9g05041 959 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 388 534 IPR029047 -
Trre9g05041 959 Gene3D - 189 361 - -
Trre9g05041 959 Coils Coil 261 281 - -
Trre9g05041 959 Gene3D - 578 737 IPR027417 -
Trre9g05041 959 Gene3D - 742 812 IPR042197 -
Trre9g05041 959 FunFam Heat shock 70 kDa 230 313 - -
Trre9g05041 959 SUPERFAMILY Toll/Interleukin receptor TIR domain 804 952 IPR035897 -
Trre9g05041 959 ProSitePatterns Heat shock hsp70 proteins family signature 1. 6 13 IPR018181 -
Trre9g05041 959 Gene3D Actin; Chain A, domain 4 230 313 - -
Trre9g05041 959 PANTHER HEAT SHOCK PROTEIN 70KDA 4 551 IPR013126 GO:0005524|GO:0140662
Trre9g05041 959 SUPERFAMILY Actin-like ATPase domain 191 383 IPR043129 -
Trre9g05041 959 ProSiteProfiles TIR domain profile. 809 959 IPR000157 GO:0007165
Trre9g05041 959 FunFam Heat shock 70 kDa 386 545 - -
Trre9g05041 959 Pfam Hsp70 protein 4 554 IPR013126 GO:0005524|GO:0140662
Trre9g05041 959 ProSitePatterns Heat shock hsp70 proteins family signature 3. 335 349 IPR018181 -
Trre9g05041 959 SMART till_3 810 950 IPR000157 GO:0007165
Trre9g05041 959 FunFam Heat shock protein 70 4 194 - -
Trre9g05041 959 Gene3D - 65 120 - -
Trre9g05041 959 Gene3D - 813 958 IPR035897 -
Trre9g05041 959 FunFam Heat shock 70 kDa protein 65 120 - -
Trre9g05041 959 Coils Coil 513 533 - -
Trre9g05041 959 PRINTS 70kDa heat shock protein signature 140 160 - -
Trre9g05041 959 PRINTS 70kDa heat shock protein signature 472 488 - -
Trre9g05041 959 PRINTS 70kDa heat shock protein signature 52 60 - -
Trre9g05041 959 PRINTS 70kDa heat shock protein signature 391 410 - -
Trre9g05041 959 PRINTS 70kDa heat shock protein signature 332 348 - -
Trre9g05041 959 PRINTS 70kDa heat shock protein signature 30 42 - -
Trre9g05041 959 PRINTS 70kDa heat shock protein signature 204 214 - -
Trre9g05041 959 PRINTS 70kDa heat shock protein signature 364 384 - -
Trre9g05041 959 PRINTS 70kDa heat shock protein signature 2 15 - -
Trre9g05041 959 CDD HSPA1-2_6-8-like_NBD 4 382 - -
Trre9g05041 959 SUPERFAMILY Actin-like ATPase domain 1 184 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g05041 Trre-Chr9 56193092 56196103 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g05041 4 542 Calmodulin-binding Proteins AT3G12580 80.996 0.0 902
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g05041 K03283 - lja:Lj0g3v0120799.1 946.036