Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04987 ATGGAAGAAAAAGATTTTACATCAAAACTTTTAGGGTTTGTTGGCAATGAGTGTATAGTCCTTGAGTCCTTGCTACTTATCAATGATCCATTGTATGGTGCTCTTCATTCAAAGAACAATGTTCCTATTCCTATTTCTCAAAGCAACCTTCAAGTTTTTAGGGAAATCGTCGCAATGAAGAAAGTAAGAAGTAATCGATCAAAGAGAATCAATTACAACATTCTTTCTTCAAAGTTTAAGGAGGTTACTTGTTGTACAAGCAACAACAAAGATGTTGGAAAAATAATAGTCAAGAAAAGAAAAACAATGGGTGAGGGATCAAGAAATCCGTCGAAGAAATTCAAGATTAAGCGGGAGAAAGAAGACGTGCAAGAAGAGCAACCCGATCTTCCATTGGCGTTTAAAGAAAGAATCGAACAACTGAAAGGTATTGATGTGAAGTTGGTGATCCAGAAAAGATTGACCATGACTGATTTGACGCGAAACCACGGTCGATTATCCGTTCCAATAGGTCAAATTAAGATCGAAGAGAGTAGTCTTTTGACACAAGAGGAGGGAATGTCTTTGGATTATGTGCCTCAAAAGAACGGGAGCAAGAAGCTTGATGGTATGTCTGTATCTATGTTGGATCCTAATCTTAAACTTTGGGATAAAATGTGCTTCAAGAAGTGGAAAATGGGAAAATCTGAGGTCTACAATATCACTGGTGGATGGTACAAACTTGTAGAAGAAAACCATTTGAAAGAAGATCAAAAGATTCAACTTTGGTCTTTTAAAAGAGACAATCATCTCAATTTCGCACTCGTCAAACTTTAG 816 0.3676 MEEKDFTSKLLGFVGNECIVLESLLLINDPLYGALHSKNNVPIPISQSNLQVFREIVAMKKVRSNRSKRINYNILSSKFKEVTCCTSNNKDVGKIIVKKRKTMGEGSRNPSKKFKIKREKEDVQEEQPDLPLAFKERIEQLKGIDVKLVIQKRLTMTDLTRNHGRLSVPIGQIKIEESSLLTQEEGMSLDYVPQKNGSKKLDGMSVSMLDPNLKLWDKMCFKKWKMGKSEVYNITGGWYKLVEENHLKEDQKIQLWSFKRDNHLNFALVKL 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04987 271 Pfam B3 domain-containing protein At2g31720-like 139 243 IPR005508 GO:0003677
Trre9g04987 271 MobiDBLite consensus disorder prediction 101 121 - -
Trre9g04987 271 SUPERFAMILY DNA-binding pseudobarrel domain 149 267 IPR015300 -
Trre9g04987 271 ProSiteProfiles Rhodanese domain profile. 225 250 IPR001763 -
Trre9g04987 271 Gene3D - 141 268 IPR015300 -
Trre9g04987 271 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 55 271 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04987 Trre-Chr9 55809080 55809895 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04987 134 268 B3 DNA Binding Superfamily AT1G05930 25.352 1.80e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04987 - - tpra:123890888 421.394