Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04964 ATGGGTGCTTGTCTCAGTAAAAAAGAATCAGAGCTAGATCATAGACATTTTGGTGTTTCTGGTTTGCATAATCACAAGAATCATGAACCCTATATGAATCAATCAAAAGCTCATTTTCAACAACCTTACCAATTACCTAATAAACATGATCCAAAGCCAAAACCTATTGTCAAAAGACCAGATTCAAACACAATCCTAGGTAAGCAATTTGAAGATGTAAGAAAAATTTACACACTTGGGGAAGAATTAGGGAGAGGAAAATGTGGTGTAACTTATCTATGCACTGAGAAATCAACTGGTTTGAAATATGCTTGCAAGTCAATTTCAAAGAGAAAATTTGTTAGTAAAGCTGAAAAAGAAGAGATAAAGAGGGAGATACAAATCATGCAACATATGAGTGGAAAACCAAATATTGTTGAGTTTAAAGGTGCTTATGAGGATAAAAATTCAGTTCATGTTGTCATGGAACTTTGTGCTGGTGGTCAGCTTTTTGATAGGATTACTGCTAAAGGGAGATATAGTGAAAGAGATGCAGCTTCAATTTGCAGACAAATTGTTAATATTGTTCATATTTGTCATTTTATGGGTGTGATGCATAGAGATTTGAAGCCTGAAAATCTCTTGTTGTCTAGTGAGGATGATAAGGCTACTATCATTGCCACTGATTTTGGCTTGTCGGTTTTCATCGAAGAAGGAAAGGTATATAATGATATAGTTGGCAGTGCATATTACGTTGCACCAGAAGTTCTACGACAGAAATATGGGAAGGAAATAGATATATGGAGTGCAGGAGTTATTTTGTATATCTTACTTTGCGGCGTGCCTCCATTTTGGGCAGAGATGCAAAAGGGGATATTCGAAGCCATATTGCAAGGTCATATTGACTTTTATAGTCCTCCATGGCCAATCATATCAAACAGCGCTAAGGACCTTGTTCGTAAGATGCTTACACAAGATCCAAAGAAACGTTTTACTGCTTCTCAGGTTCTAGAGCATCCATGGATTAAAGAAAGTGGAAATGCTTCTGACAAGCCAATAAACAGTGCATAA 1050 0.3648 MGACLSKKESELDHRHFGVSGLHNHKNHEPYMNQSKAHFQQPYQLPNKHDPKPKPIVKRPDSNTILGKQFEDVRKIYTLGEELGRGKCGVTYLCTEKSTGLKYACKSISKRKFVSKAEKEEIKREIQIMQHMSGKPNIVEFKGAYEDKNSVHVVMELCAGGQLFDRITAKGRYSERDAASICRQIVNIVHICHFMGVMHRDLKPENLLLSSEDDKATIIATDFGLSVFIEEGKVYNDIVGSAYYVAPEVLRQKYGKEIDIWSAGVILYILLCGVPPFWAEMQKGIFEAILQGHIDFYSPPWPIISNSAKDLVRKMLTQDPKKRFTASQVLEHPWIKESGNASDKPINSA 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04964 349 Pfam Protein kinase domain 77 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g04964 349 FunFam Calcium-dependent protein kinase 1 79 162 - -
Trre9g04964 349 Gene3D Phosphorylase Kinase; domain 1 79 163 - -
Trre9g04964 349 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Trre9g04964 349 FunFam calcium-dependent protein kinase 1 163 342 - -
Trre9g04964 349 CDD STKc_CAMK 77 334 - -
Trre9g04964 349 PANTHER SERINE/THREONINE-PROTEIN KINASE 45 345 - -
Trre9g04964 349 ProSiteProfiles Protein kinase domain profile. 77 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g04964 349 SMART serkin_6 77 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g04964 349 SUPERFAMILY Protein kinase-like (PK-like) 77 338 IPR011009 -
Trre9g04964 349 Gene3D Transferase(Phosphotransferase) domain 1 164 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04964 Trre-Chr9 55678690 55680589 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04964 53 349 EF-hand Containing Proteins AT3G20410 75.084 1.80e-170 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Trre9g04964 Pkinase 8.1e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04964 K13412 - gmx:100798651 532.717