Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04953 ATGACGAACAGTGTCTCGTCTATGGCGTACATGAAACAGTTGGTTATTGAACTCGGTAACCCTGATCTCAGGGAAAATGCTATTCGTGCGCTCTCCAAGAGGAAGGACTTATTTTATGAACTTGCACCTTTATTGTGGCATTCTGTTGGTACTATTGCAGTATTATTACTGGAAATAACTTCAATATATGATAATCTTTCACCACCAACTCTTTCTACTGCACAATCAACTCGAGTGTGCAATGTTCTTGCATTAGTTCAGTGTGTGGCATCTCACCCTGATACAAGGATGTTACTCATCAATGCTTTCATACCTCAGTTTCTGTTTCCTTTCCTTGAAACGACATGTACCTTACCCCAATTTGACAATTTGAGGCTTGCGACTCTCGGAGTCATTGGTGTCTTGGTAAAGGCCGAAAGCAAAGAAGTTATAGATTATCTTCTTTCAACTGAAATCGTTCCATTATGTTTGCGTATCATGGAGATCGGGAAAGAAATGTCAAAAACTGTTGCTACTTTCATCCTACAAAAAATTTTGTTGGATGAAGATGGTCTTGCTTGTGTATGTGCTACCGCAAACCGTTTCTTTTCTGTCTGTCGAATTTTGAACATGGTGATGGAAAAAATTCAAAGACAACCTTCACCTCGGCTTTTGAAACTTATAATTCCATGTTATGCTCGTTTGTCTCAAAATCCTGGGGCTGGCATTGCATTAACAAACTCTCTTCCGGCTGTGTTTGCTAACCCCGCTTTCATCAATTACCTTCGTGGAGATCCAGCAACTTGGAGGTGGATAGAGCAATTGTTTGAAAATATTAGGAAGAATGAAGTTCAGTCAGCACAATCTGAAATAAAAATGGATGGTATTATGTGGTACACATCATCAGGACAGAATAAATGA 900 0.3944 MTNSVSSMAYMKQLVIELGNPDLRENAIRALSKRKDLFYELAPLLWHSVGTIAVLLLEITSIYDNLSPPTLSTAQSTRVCNVLALVQCVASHPDTRMLLINAFIPQFLFPFLETTCTLPQFDNLRLATLGVIGVLVKAESKEVIDYLLSTEIVPLCLRIMEIGKEMSKTVATFILQKILLDEDGLACVCATANRFFSVCRILNMVMEKIQRQPSPRLLKLIIPCYARLSQNPGAGIALTNSLPAVFANPAFINYLRGDPATWRWIEQLFENIRKNEVQSAQSEIKMDGIMWYTSSGQNK 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04953 299 Gene3D - 3 274 IPR011989 -
Trre9g04953 299 PANTHER UNCHARACTERIZED 7 276 IPR007216 GO:0006402|GO:0030014
Trre9g04953 299 FunFam Cell differentiation family, Rcd1-like containing protein 5 275 - -
Trre9g04953 299 SUPERFAMILY ARM repeat 19 181 IPR016024 -
Trre9g04953 299 Pfam Cell differentiation family, Rcd1-like 14 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04953 Trre-Chr9 55592309 55596010 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Trre9g04953 Rcd1 3.1e-98 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04953 K12606 - mof:131164386 320.857