Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04948 ATGTGTATTGGAAAAGTTGAATTCATTGTGAATGTGACCAACGAGGAAACAGTGGCAGCTGCACTACCAATGCAAGAACATTGGTTGCCACTATCAAATCTTGATTTGATTCTTCCTCCTGTTGATGTTAGTGTGTTCTTTTGCTACAATAAACCTATAATTACTATTGGCACCCACCATAATATTATTGAGTGTTTGAAAAATTCATTAGCTGAGACTCTTGTTTCTTATTATGCCTTTGCTGGTGAAGTGGTGAAAAATTCCATGGGTGAACCTGAGTTACTTTGCAATAACCGTGGTGTTGATTTTGTTGAAGCTTTTGCTGATGTTGAATTACAATCTCTTAATTTGTATAATCCAGATGAAAGTGTTGAAGGGAAGCTTGTTCCAAAGAAGAAACATGGTGTTCTTGCTGTTCAGGCAACATGGATGAAATGTGGTGGATTAGTAGTGGCATGCACTTTTGACCATCGTATAGCGGATGCCTATTCTGCAAATATGTTCCTTGTATCTTGGGCCGAGATAGCCCGATCCAAGAATAACAAATCATTCATTCCAACAACACAACCTTGTTTTCGGAGATCTCTTTTGACCCCACGACGCCCACCTTCCATCCATCCTTCAATTTATGACATGTACGTCCCCCTCTCTGATCTACCTCCTCCACCTGCACCTGAGCTTGAATCCGATATTAAAACTGATCCAATAATAAGTCGCATATACTATGTAACAAGTGAAGAACTAAACAACATGCAATCACAAGCCAACTCAAACAATGGTGGCAGTGTTAAGCGGTCAAAACTTGAATCATTTTCTGCTTTACTGTGGAAGATGGTTGCCGCGGCAGCTTCAACTGATAATGAAAATATCGTTGCAAAAATGGGGTTGGTTGTTGATGGAAGAAAGAGGCTAAGCAACGGTGACAAAAACAAGGAAGAGATTATGAGCTCATATTTCGGGAATGTGCTCTCAATTCCCTATGGTGGTAGATTGGCGAACGAGTTGGTTGAAAATCCATTAAGTTGGGTGGCAGACCGAGTTCATAATTTTTTGGAGGAGGCAGTGACGGAGGAGCATTTCTTGGGACTAATTGATTGGGTGGAAGAGCATCGACCAGTTCCAGGGTTGGCGAGGATATATTGTAGTAGCACTGATGAAGAAGAGGGCCCGACATTTGTTGTGTCATCCGGCCAACGGTTTCCGGAGTCGAAGGTGGATTTTGGATGGGGGAAGCCTGTGCTTGGATCTTATCATTTTCCTTGGGGTGGACCGAATGGTGGTGCTGGATATGTTATGCCAATGCCTAGTCCTAAAAGGAATGGTGATTGGTTGCTCTATATGAACCTTCCCAAGACACACTTGCACTACATGGAGGCTCGAGCTCCCCATTTCTTTAGACCAATCTCTTGGGATTACCTTCTCAATTAA 1428 0.4237 MCIGKVEFIVNVTNEETVAAALPMQEHWLPLSNLDLILPPVDVSVFFCYNKPIITIGTHHNIIECLKNSLAETLVSYYAFAGEVVKNSMGEPELLCNNRGVDFVEAFADVELQSLNLYNPDESVEGKLVPKKKHGVLAVQATWMKCGGLVVACTFDHRIADAYSANMFLVSWAEIARSKNNKSFIPTTQPCFRRSLLTPRRPPSIHPSIYDMYVPLSDLPPPPAPELESDIKTDPIISRIYYVTSEELNNMQSQANSNNGGSVKRSKLESFSALLWKMVAAAASTDNENIVAKMGLVVDGRKRLSNGDKNKEEIMSSYFGNVLSIPYGGRLANELVENPLSWVADRVHNFLEEAVTEEHFLGLIDWVEEHRPVPGLARIYCSSTDEEEGPTFVVSSGQRFPESKVDFGWGKPVLGSYHFPWGGPNGGAGYVMPMPSPKRNGDWLLYMNLPKTHLHYMEARAPHFFRPISWDYLLN 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04948 475 Pfam Transferase family 10 459 - -
Trre9g04948 475 Gene3D - 224 459 IPR023213 -
Trre9g04948 475 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 25 436 - -
Trre9g04948 475 Gene3D - 8 211 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04948 Trre-Chr9 55572507 55574274 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04948 10 458 Monolignol Biosynthesis Gene Families AT5G48930 25.272 2.74e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04948 - - gmx:100809201 647.121