Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04938 ATGTGTATTGGAAAAGTTGAATTCATTGTGAATGTGACCAACGAGGAAACAGTGGCAGCTGCACTACCAATGCAAGAACATTGGTTGCCACTATCAAATCTTGATTTGATTCTTCCTCCTGTTGATGTTAGTGTGTTCTTTTGCTACAATAAACCTATAATTACTATTGGCACCCACCATAATATTATTGAGTGTTTGAAAAATTCATTAGCTGAGACTCTTGTTTCTTATTATGCCTTTGCTGGTGAAGTGGTGAAAAATTCCATGGGTGAACCTGAGTTACTTTGCAATAACCGTGGTGTTGATTTTGTTGAAGCTTTTGCTGATGTTGAATTACAATCTCTTAATTTGTATAATCCAGATGAAAGTGTTGAAGGGAAGCTTGTTCCAAAGAAGAAACATGGTGTTCTTGCTGTTCAGGCAACATGGATGAAATGTGGTGGATTAGTAGTGGCATGCACTTTTGACCATCGTATAGCGGATGCCTATTCTGCAAATATGTTCCTTGTATCTTGGGCCGAGATAGCCCGATCCAAGAATAACAAATCATTCATTCCAACAACACAACCTTGTTTTCGGAGATCTCTTTTGACCCCACGACGCCCACCTTCCATCCATCCTTCAATTTATGACATGTACGTCCCCCTCTCTGATCTACCTCCTCCACCTGCACCTGAGCTTGAATCCGATATTAAAACTGATCCAATAATAAGTCGCATATACTATGTAACAAGTGAAGAACTAAACAACATGCAATCACAAGCCAACTCAAACAATGGTGGCAGTGTTAAGCGGTCAAAACTTGAATCATTTTCTGCTTTACTGTGGAAGATGGTTGCCGCGGCAGCTTCAACTGATAATGAAAATATCGTTGCAAAAATGGGGTTGGTTGTTGATGGAAGAAAGAGGCTAAGCAACGGTGACAAAAACAAGGAAGAGATTATGAGCTCATATTTCGGGAATGTGCTCTCAATTCCCTATGGTGGTAGATTGGCGAACGAGTTGGTTGAAAATCCATTAAGTTGGGTGGCAGACCGAGTTCATAATTTTTTGGAGGAGGCAGTGACAGAGGAGCATTTCTTGGGACTAATTGATTGGGTGGAAGAGCATCGACCAGTTCCAGGGTTGGCGAGGATATATTCTAGTAGCACTGGTGGAGAAGAGGGCCCGACATTTGTTGTGTCATCCGGCCAACGGTTTCCGGAGTCGAAGGTGGATTTTGGATGGGGGAAGCCTGTGCTTGGATCTTATCATTTTCCTTGGGGTGGACCGGATGGTGGTGCTGGATATGTTATGCCAATGCCTAGTCCTAAAAGGAATGGTGATTGGTTGCTCTATATGCACCTTCCTAAGACACACTTGCACTACATGGAGGCTCGAGCTCCCCATTTCTTTAGACCAATCTCTTGGGATTACCTTCTCAATTAA 1428 0.4251 MCIGKVEFIVNVTNEETVAAALPMQEHWLPLSNLDLILPPVDVSVFFCYNKPIITIGTHHNIIECLKNSLAETLVSYYAFAGEVVKNSMGEPELLCNNRGVDFVEAFADVELQSLNLYNPDESVEGKLVPKKKHGVLAVQATWMKCGGLVVACTFDHRIADAYSANMFLVSWAEIARSKNNKSFIPTTQPCFRRSLLTPRRPPSIHPSIYDMYVPLSDLPPPPAPELESDIKTDPIISRIYYVTSEELNNMQSQANSNNGGSVKRSKLESFSALLWKMVAAAASTDNENIVAKMGLVVDGRKRLSNGDKNKEEIMSSYFGNVLSIPYGGRLANELVENPLSWVADRVHNFLEEAVTEEHFLGLIDWVEEHRPVPGLARIYSSSTGGEEGPTFVVSSGQRFPESKVDFGWGKPVLGSYHFPWGGPDGGAGYVMPMPSPKRNGDWLLYMHLPKTHLHYMEARAPHFFRPISWDYLLN 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04938 475 Gene3D - 224 459 IPR023213 -
Trre9g04938 475 Gene3D - 8 211 IPR023213 -
Trre9g04938 475 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 25 436 - -
Trre9g04938 475 Pfam Transferase family 10 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04938 Trre-Chr9 55546161 55547928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04938 10 458 Monolignol Biosynthesis Gene Families AT5G48930 25.272 1.13e-37 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04938 - - gmx:100809201 647.506