Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04937 ATGTATCGATACATAGCTCTTCAGAAATCTGATCTCCGAGAAAATGCTATTCATGAGCTCTCCAAGATGAAGGAGTTATCTCAGGAACTTGCCCTTTTATTGTGGAATTCTTTTGGTACTATTGCAGTACTTTTACAGGAAGTAATTGCAATATATCCACATCTTTCACCAGAATCTCTTACTTCTGCACAATCAACTCGAGTGTGCAACGTTCTTGCATTACTTACGTGTGTTGCATCTCACCCTGATACAAAGATGCCATTTCTCAATGGTAATCTAACATACCTTTTGTATTTGTATCCTTTCCTTGATACAACAACCAAGTTACCACATTTTGAGAATTTGAGACTTTCTAGTCTTGGAGTCATTGGTGCCTTGGTAAAGGTTAGCACCAAAGAAGTTATAGGTTTCTTTCTTGCAAGCGAGATAATTCCTTTGTGTTTGCGCAATATGGAAATCGGCAAAGAGCTAACAAAAACTGTTGCAACATTAATACTTGAGAAAATTTTGTTAGATGATGATGGTTTGGCTTGTCATCTAATTCCATGCTATTCTCGTTTGTCACAAAATCGTTGGGCCGGCAATGCATTAAGAACCTCTCTTCCGAATGTGTTAGGAAAACCGACTTTCATTAACTCCCTTCGTGAAGACCCAGCAACTTGGATGTGGGCACAACAATTGTATGACAATGTTAGGGACAACCAAGTTCATCATGGAGGAGGAAACAATGATATTGTGGGATCGTCATCAGCATCCTAA 759 0.3887 MYRYIALQKSDLRENAIHELSKMKELSQELALLLWNSFGTIAVLLQEVIAIYPHLSPESLTSAQSTRVCNVLALLTCVASHPDTKMPFLNGNLTYLLYLYPFLDTTTKLPHFENLRLSSLGVIGALVKVSTKEVIGFFLASEIIPLCLRNMEIGKELTKTVATLILEKILLDDDGLACHLIPCYSRLSQNRWAGNALRTSLPNVLGKPTFINSLREDPATWMWAQQLYDNVRDNQVHHGGGNNDIVGSSSAS 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04937 252 Gene3D - 178 236 IPR011989 -
Trre9g04937 252 Pfam Cell differentiation family, Rcd1-like 178 231 - -
Trre9g04937 252 Pfam Cell differentiation family, Rcd1-like 7 177 - -
Trre9g04937 252 SUPERFAMILY ARM repeat 10 173 IPR016024 -
Trre9g04937 252 Gene3D - 3 177 IPR011989 -
Trre9g04937 252 PANTHER UNCHARACTERIZED 178 235 IPR007216 GO:0006402|GO:0030014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04937 Trre-Chr9 55538064 55542386 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Trre9g04937 Rcd1 1.2e-69 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04937 K12606 - gmx:100792752 262.307