Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04909 ATGAATAGTATTCTCCTTGTTGCTCTCCTTTTACTGATCCCGATTCTCTTTCTGCTAAGAAGAACCAAACAATCCAAAAGGGTTCCTCCAGGTTCACTTGGAATTCCCATTATTGGTCAAAGCCTTGGCTATCTTCGAGCTCGGCGTGCCAACACAGCAGAAAAATGGATTGAAGACAGAATCAACAAGTACGGTCCTATTTCAAAGCTAAGCCTATTTGGAAAACCAACTGTTTTGATTCACGGACAGGCTGCAAATAAGTTTATATTTACCAATGGCAGTGGCAATATTGTTAACATGCAAATACAGTCTATTAAGATGATATTAGGTGACAGGAACTTGCAAGAACTGAGTGGAAAAGATCATAGTAGAGTTAGAGGTGCACTTGTCTCATTCTTGAAGCCAGAATCTTTGAAACAATATGTTTGTAAAATTGATGAAGAAGTTAGGAGTCACATTCAGATGCATTGGGAAGGGAAACAGCAGGTCAAGGTATTGCCCCTAATGAAGACTCTCACATTCAACATAATTTCCTCTCTTTTGTTTGGTCTTGAGAGTGGAAAACAAAGAGATCAATTCATTAATCCATTCCAAGAATTGATGAAAGGAGTGGTGTCTGTCCCAATTAATATACCCTTCACACGCTACAACCGCAGCCTCAAGGCAAGCGCAAGGATCCAAAACATGTTGAAGGAGATTGTGCACCAGAAGACAGTTGAACAGGAGAAAAGTGGCGTCAATCCCCGCCAAGACTTAATCAGTTGCTTGCTTAGCATGGTTGAAGATGACAAACAAGTTTTAACTGAGAAGGAAATCATCCATAATGCTATGCTTGTCATGGTTGCAGGATATGACACATCATCTGTTCTAATAACTTTCATTATCCGAATCTTGGCTAATGAACCGGCTATTTGTGCTGCTGTTCTTCAAGGAATGCATAGACTTGTGTCAGTGGTGTGA 960 0.4031 MNSILLVALLLLIPILFLLRRTKQSKRVPPGSLGIPIIGQSLGYLRARRANTAEKWIEDRINKYGPISKLSLFGKPTVLIHGQAANKFIFTNGSGNIVNMQIQSIKMILGDRNLQELSGKDHSRVRGALVSFLKPESLKQYVCKIDEEVRSHIQMHWEGKQQVKVLPLMKTLTFNIISSLLFGLESGKQRDQFINPFQELMKGVVSVPINIPFTRYNRSLKASARIQNMLKEIVHQKTVEQEKSGVNPRQDLISCLLSMVEDDKQVLTEKEIIHNAMLVMVAGYDTSSVLITFIIRILANEPAICAAVLQGMHRLVSVV 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04909 319 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04909 319 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04909 319 PRINTS E-class P450 group I signature 271 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04909 319 PRINTS E-class P450 group I signature 291 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04909 319 PANTHER CYTOCHROME P450 26 26 308 - -
Trre9g04909 319 Pfam Cytochrome P450 29 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04909 319 SUPERFAMILY Cytochrome P450 22 313 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04909 319 Gene3D Cytochrome P450 19 317 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04909 Trre-Chr9 55409752 55411117 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04909 14 313 Cytochrome P450 AT5G36140 31.908 2.19e-55 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04909 - - gmx:100790001 452.595