Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04908 ATGAAGTACACTTGGAGAGTAGCAAATGAAACTCTTAGAATGTTTCCTCCAGTCTTTGGTACATTCAGAAAAGCAGCAGCAGATATTGATTATGGTGGATACATTATACCTAAAGGGTGGCAGATCTTTTGGGTTACATCAATGACTCACATGAACAGCAATATTTTCCCAGAACCATCAAAGTTTGATCCGAGTAGATTTGAAAACCAAGCATCTACACCACCCTATTGCTATGTTCCATTTGGAGGGGGAGCAAGAATATGTCCAGGAAATGAGTTTGCTAGGGTTGAAACTCTGGTGGCAATTCATTACCTTGTGACCAAGTTCAGTTGGAAGCGACTTTCAGACAATTCTTTCAGCAGGGATCCAATGCCAACACCAAATCAAGGCCTACTTATTGAACTTTGCCCAAGGAAACTATCTTAG 426 0.4085 MKYTWRVANETLRMFPPVFGTFRKAAADIDYGGYIIPKGWQIFWVTSMTHMNSNIFPEPSKFDPSRFENQASTPPYCYVPFGGGARICPGNEFARVETLVAIHYLVTKFSWKRLSDNSFSRDPMPTPNQGLLIELCPRKLS 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04908 141 PRINTS P450 superfamily signature 79 88 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04908 141 PRINTS P450 superfamily signature 88 99 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04908 141 PRINTS P450 superfamily signature 6 17 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04908 141 PRINTS B-class P450 signature 88 99 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04908 141 PRINTS B-class P450 signature 51 66 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04908 141 PRINTS B-class P450 signature 6 17 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04908 141 PRINTS B-class P450 signature 23 50 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04908 141 PRINTS B-class P450 signature 79 88 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04908 141 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 81 90 IPR017972 GO:0005506|GO:0016705
Trre9g04908 141 Pfam Cytochrome P450 1 118 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04908 141 Gene3D Cytochrome P450 1 136 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04908 141 PANTHER CYTOCHROME P450 26 1 126 - -
Trre9g04908 141 SUPERFAMILY Cytochrome P450 1 138 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04908 Trre-Chr9 55408906 55409411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04908 1 118 Cytochrome P450 AT5G45340 47.059 3.02e-31 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04908 - - gmx:100790001 254.988