Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04884 ATGGAATTCTTCAATGCTCAAAGGAGAAACAAATTGTATGAAGAATTTGTTCATCCTCGAATCATGAAACACGGAAAAATCTTCAAAACAAGGATCATAGGTTCACCAACTGTGATTGTAAATGGAGCTGAAGCCAATAAATTTATTCTATCTAATGAATTTAAGTTGGTAAAAAGTTCTTGGCCTTCTTCCTCAGTTCATCTCATGGGAAAAGACTCTATCATGGAGAAAGATGGCGAAAGACACCGTTTTCTTCGCGGTGTTATCGGCACTAGTCTTGGCTATGCTGGACTTGAAACATTAGTTCCAAAATTATGCAACTTTGTTCAATTATATTTATCTAAAAATTGGCGTTATCAAGAAGAGATTAGTCTCTACCGTTCAACGAAAGTTCTTACATTTAGCATAGTTTTCGAGTGTTTGTTAGGTATCAAAGTCGAACCGGGTATGGTAGATACATTTGAGAGAGTTTTGGAAGGAGTTTTCTCTCCAGCAATTAAGTTTCCAGGTTCTAAATTTTGGAGAGCAATGAAAGCAAGAAAGGAGATAGAAAAGATGATAATGAAAGTGGTGAGAAAAAAGAGAAAGGAAATAGAAGAAGGAAGGTTCAAAAGAGAGGAAGATACAATGCTAATGTCTAAATTGGTGTATGGAATGATCCAAGGAGAGATTACTGAAAAAGAGATTATAGATAATGTGGTTTTGCTAGTTTTTGCAGCTCATGATACTACTTCTTTTGCTGTTGCCATGACTTTCAAGATGCTTGCTCAACATCCTGATTGCTATGGCAAAGTTCTACAAGAACATGTTAATTTAATGAGAAACAAAGGAAGGGGTGAGAGTCTCAATGTAGAAGATATAAAGAAGATGAAGTATACATGGCAAGTTGCTAGAGAAAGCATGAGATTGTTCCCTCCAATATTTGGTTCTTTCAGGAAGGCAATCACTGATATTGAATATGAAGGATTCACTATACCTAAAGGATGGAAGGTGCTATGGACAACATATGGGACACATTACAATGAAAATTATTTTAAGGATCCTTTAAGTTTCAATCCAAGTAGGTTTGAGGAAGGAATAGCACAATATGCATTTGTTCCCTTTGGAGGAGGGCCAAGAGTGTGTGCAGGGTACCAATTAGCCAAGCTAAATATCCTTATCCTTGTGCATTATGTTGTGACACAATATGATTGGTCCTTACTCCATCATGATGAAACAGTGACAATGGATCCTCTACCATTTCCTTCTCTTGGAATGCCTATTAGAATTTCTCCTAAGCATATATGA 1287 0.3644 MEFFNAQRRNKLYEEFVHPRIMKHGKIFKTRIIGSPTVIVNGAEANKFILSNEFKLVKSSWPSSSVHLMGKDSIMEKDGERHRFLRGVIGTSLGYAGLETLVPKLCNFVQLYLSKNWRYQEEISLYRSTKVLTFSIVFECLLGIKVEPGMVDTFERVLEGVFSPAIKFPGSKFWRAMKARKEIEKMIMKVVRKKRKEIEEGRFKREEDTMLMSKLVYGMIQGEITEKEIIDNVVLLVFAAHDTTSFAVAMTFKMLAQHPDCYGKVLQEHVNLMRNKGRGESLNVEDIKKMKYTWQVARESMRLFPPIFGSFRKAITDIEYEGFTIPKGWKVLWTTYGTHYNENYFKDPLSFNPSRFEEGIAQYAFVPFGGGPRVCAGYQLAKLNILILVHYVVTQYDWSLLHHDETVTMDPLPFPSLGMPIRISPKHI 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04884 428 CDD CYP90-like 20 425 - -
Trre9g04884 428 SUPERFAMILY Cytochrome P450 13 425 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04884 428 Pfam Cytochrome P450 14 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04884 428 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 368 377 IPR017972 GO:0005506|GO:0016705
Trre9g04884 428 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04884 428 PRINTS P450 superfamily signature 239 256 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04884 428 PRINTS P450 superfamily signature 295 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04884 428 PRINTS P450 superfamily signature 366 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04884 428 Gene3D Cytochrome P450 2 425 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04884 428 PRINTS E-class P450 group I signature 334 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04884 428 PRINTS E-class P450 group I signature 21 40 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04884 428 PRINTS E-class P450 group I signature 365 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04884 428 PRINTS E-class P450 group I signature 375 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04884 428 PANTHER CYTOCHROME P450 26 14 411 - -
Trre9g04884 428 FunFam Taxadiene 5-alpha hydroxylase 1 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04884 Trre-Chr9 55195598 55197724 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04884 1 331 Cytochrome P450 AT2G42850 64.759 2.01e-148 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04884 - - gmx:100793336 724.931