Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04883 ATGACTATAAATATTATCTATTTTCTATCATGTGCTCTGTTTCCTCTGTTTGTTCTGTTCTCATTCAATTTCTTGAGGCACAAGCAACAAAGAAACAAACACAAAACAAAGCTTCCACCAGGTGAAATGGGGTTTCCATTCATAGGAGAGACCATGGAATTCTTCAATGCTCAAAGGAGAAACAAATTGTATGAAGAATTTGTTCATCCTCGAATCATGAAACACGGAAAAATCTTCAAAACAAGGATCATAGGTTCACCAACTGTGATTGTAAATGGAGCTGAAGCCAATAAATTTATTCTATCTAATGAATTTAAGTTGGTAAAAAGTTCTTGGCCTTCTTCCTCAGTTCATCTCATGGGAAAAGACTCTATCATGGAGAAAGATGGCGAAAGACACCGTTTTCTTCGCGGTGTTATCGGCACTAGTCTTGGCTATGCTGGACTTGAAACATTAGTTCCAAAATTATGCAACTTTGTTCAATTATATTTATCTAAAAATTGGCGTTATCAAGAAGAGATTAGTCTCTACCGTTCAACGAAAGTTCTTACATTTAGCATAGTTTTCGAGTGTTTGTTAGGTATCAAAGTCGAACCGGGTATGGTAGATACATTTGAGAGAGTTTTGGAAGGAGTTTTCTCTCCAGCAATTAAGTTTCCAGGTTCTAAATTTTGGAGAGCAATGAAAGCAAGAAAGGAGATAGAAAAGATGATAATGAAAGTGGTGAGAAAAAAGAGAAAGGAAATAGAAGAAGGAAGGTTCAAAAGAGAGGAAGATACAATGCTAATGTCTAAATTGGTGTATGGAATGATCCAAGGAGAGATTACTGAAAAAGAGATTATAGATAATGTGGTTTTGCTAGTTTTTGCAGCTCATGATACTACTTCTTTTGCTGTTGCCATGACTTTCAAGATGCTTGCTCAACATCCTGATTGCTATGGCAAAGTTCTACAAGAACATGTTAATTTAATGAGAAACAAAGGAAGGGGTGAGAGTCTCAATGTAGAAGATATAAAGAAGATGAAGTATACATGGCAAGTTGCTAGAGAAAGCATGAGATTGTTCCCTCCAATATTTGGTTCTTTCAGGAAGGCAATCACTGATATTGAATATGAAGGATTCACTATACCTAAAGGATGGAAGGTGCTATGGACAACATATGGGACACATTACAATGAAAATTATTTTAAGGATCCTTTAAGTTTCAATCCAAGTAGGTTTGAGGAAGGAATAGCACAATATGCATTTGTTCCCTTTGGAGGAGGGCCAAGAGTGTGTGCAGGGTACCAATTAGCCAAGCTAAATATCCTTATCCTTGTGCATTATGTTGTGACACAATATGATTGGTCCTTACTCCATCATGATGAAACAGTGACAATGGATCCTCTACCATTTCCTTCTCTTGGAATGCCTATTAGAATTTCTCCTAAGCATATATGA 1440 0.3646 MTINIIYFLSCALFPLFVLFSFNFLRHKQQRNKHKTKLPPGEMGFPFIGETMEFFNAQRRNKLYEEFVHPRIMKHGKIFKTRIIGSPTVIVNGAEANKFILSNEFKLVKSSWPSSSVHLMGKDSIMEKDGERHRFLRGVIGTSLGYAGLETLVPKLCNFVQLYLSKNWRYQEEISLYRSTKVLTFSIVFECLLGIKVEPGMVDTFERVLEGVFSPAIKFPGSKFWRAMKARKEIEKMIMKVVRKKRKEIEEGRFKREEDTMLMSKLVYGMIQGEITEKEIIDNVVLLVFAAHDTTSFAVAMTFKMLAQHPDCYGKVLQEHVNLMRNKGRGESLNVEDIKKMKYTWQVARESMRLFPPIFGSFRKAITDIEYEGFTIPKGWKVLWTTYGTHYNENYFKDPLSFNPSRFEEGIAQYAFVPFGGGPRVCAGYQLAKLNILILVHYVVTQYDWSLLHHDETVTMDPLPFPSLGMPIRISPKHI 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04883 479 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04883 479 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04883 479 PRINTS P450 superfamily signature 426 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04883 479 PRINTS P450 superfamily signature 417 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04883 479 SUPERFAMILY Cytochrome P450 32 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04883 479 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 419 428 IPR017972 GO:0005506|GO:0016705
Trre9g04883 479 Gene3D Cytochrome P450 27 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04883 479 PANTHER CYTOCHROME P450 26 35 462 - -
Trre9g04883 479 CDD CYP90-like 71 476 - -
Trre9g04883 479 FunFam Taxadiene 5-alpha hydroxylase 29 477 - -
Trre9g04883 479 Pfam Cytochrome P450 39 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04883 479 PRINTS E-class P450 group I signature 426 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04883 479 PRINTS E-class P450 group I signature 385 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04883 479 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04883 479 PRINTS E-class P450 group I signature 416 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04883 Trre-Chr9 55195598 55197877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04883 38 382 Cytochrome P450 AT2G42850 65.318 9.80e-157 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04883 - - gmx:100793336 778.089