Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04814 ATGAAAGTCCTCATCTTAAGTTTGCTTGATAGTCAACTCACAATTGAAGAGCCAATTAAGCAATTTTCATATTTGACTGTCATGAATTTCTCAAATAATCAAATTATCACAACATTTCCGGATGTGTCCAAAGTTGAAAATTTGAGAGAATTGCGAATTGATTATTGTCAGAGTTTAACTACAGTTCATGAATCCATTGGATTTCTCAAACATCTTGTCAACTTAAGCGTTTCCGGATGCACCAAACTTCAAAATTTTCTGCAGAGAATGTTTCTACCATCTCTAGAAGTCCTTAAACTTGATTGGTGTCAAAAACTTGAACACTTCCCAGATATAGAGAATGAGATGAATACACCATTGAAGATTCATATGATGGGTACCTCTATTAAGAAGCTGCCAAATTCAGTTGGTAATCTTATAGGACTATTTTCAATGGACATGAAACACAGCGAGAATCTCGAATATCTACCAAGTTGTTTATTCAAGTTACCTAATGTTATTGCATTTGACTTTGGAGGTTGTTCTAAACTTGGTGAATCTTTCAGAAGATTTGTACGTCATAGCCCTTCAGAAGACAATGAACGTTCAACATTAAAAGTAATGCATCTTGAACATAGTCGTTTGGCAGATGACGATATGCGGACAATTCTCGTATGTTTTCCAAAATTAGAAGAATTGAATGTGTCATATAATTACAAGTTGGTCTCTCTCCCAGCGTGCATTAAAGAATCTAATCACTTGAAGAATCTTAATGTCCATGGTTGTTGGAAACTTAAACACATTTCAGAGTTGCCATGCACTATTCAAAAAATAGATGCAAGAAAATGCTTCAACATTTCTTCGGAGACATCAAACATGTTATGGGATCAGGTGAAAAAAGAGAGACATGGATTAGTAATTGTGATGCCTGAAATCAAGGTACCAAAATGGTTCGATTATAGTTGTAAAGGAGGAATTCCGTGTTTATGGGTTCGTAGGAAGTTTCCCATTAATGTTGTTTTTGCATTGGTGTTCCAAGCTGTGGATGGGAGGCAAAGTGGATATAATTCCTATCTTAAACTTCATTTGGTTATCAACGGTCAATCCATGGTAGTCAAGATCGCGATCTGGAGCGTAAGATCTCCCTCCAATAGAATCCCTATGAATGATCAAATTATGATGATGGAGGAGTTAGCTTTTGATGAAATACTTGAACCTGAGGACGAAATTAGAGGCAAACTTCAAGCTAAAGTGACAGTGATTCAAACTATGATGAAATTGCTAGTTTTGCCATTGAAATTGTTTTTGATAAGAGTTGGCGTCAACTTTGACTAG 1314 0.3577 MKVLILSLLDSQLTIEEPIKQFSYLTVMNFSNNQIITTFPDVSKVENLRELRIDYCQSLTTVHESIGFLKHLVNLSVSGCTKLQNFLQRMFLPSLEVLKLDWCQKLEHFPDIENEMNTPLKIHMMGTSIKKLPNSVGNLIGLFSMDMKHSENLEYLPSCLFKLPNVIAFDFGGCSKLGESFRRFVRHSPSEDNERSTLKVMHLEHSRLADDDMRTILVCFPKLEELNVSYNYKLVSLPACIKESNHLKNLNVHGCWKLKHISELPCTIQKIDARKCFNISSETSNMLWDQVKKERHGLVIVMPEIKVPKWFDYSCKGGIPCLWVRRKFPINVVFALVFQAVDGRQSGYNSYLKLHLVINGQSMVVKIAIWSVRSPSNRIPMNDQIMMMEELAFDEILEPEDEIRGKLQAKVTVIQTMMKLLVLPLKLFLIRVGVNFD 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04814 437 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 20 111 - -
Trre9g04814 437 SUPERFAMILY L domain-like 5 284 - -
Trre9g04814 437 Gene3D Ribonuclease Inhibitor 2 121 IPR032675 -
Trre9g04814 437 Gene3D Ribonuclease Inhibitor 122 297 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04814 Trre-Chr9 54814176 54817900 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04814 25 183 WRKY Transcription Factor Family AT4G12020 35.185 2.27e-18 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04814 - - tpra:123882301 474.552