Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04813 ATGGCAAATTATGAAGAGCAGTCGGATGCATTGTCTGAAGTTACAAACTTGAAAGGTCACCACTATCACATCCACAAGGGGAACGAAATCGATCATGTTAAAAAGATTGCCGAAAAGGTTCATGCTAAGATTGCTCCTAAACCTCTACTTGTTGGTGAGAAACCAGTTGGACTTGATCAACGCATAGAAGAGGTGAAGTCACTTCTAGACTTGAAGCCAAAAGATGATACTGATATGGGTCGAGAGATTATTAGGCAAGAGGAACCAAATAATCCCGCAAAACGTAGTAGATTATGGCTTCAAGAAGAAGTCATTAATGTATTATCGGCCAATGATTCTGGGAGTGATGCAATTCAGGGGATAGTGCTTTATCCTCCAAAACGTATAACAGATCCTAAACATCTTCCAAATTATTTAAGGCTACTTGACTGGAAGTTTTACCCTTCGAAGACTTTCCCACCAAAATTTTATCCGAAGGATGTCATCATCTTAAAGTTGCCTAATGGTCGACTTAAATTGGAAGAGCCATTTAAGCAATTTTCATGTCTGACCGTCATGAATTTCTCAAATAATAAATCTATCACAACAATGCCCGACGTGTCCGAAGTTGAAAATTTGAGAGAATTGCGGCTTGATTATTGTTTGAACTTAACCATGGTTCATGAATCCATTGGATTTCTCGAACATCTTGTCCATTTAAGCGCTTCGGAATGCAAAAAACTTGAAATCTTTTTGAAAAGCATGTTTTTACCATCTCTAGAAGTCCTTAAACTTGATTGGTGTGAAAAACTTGAACATTTCCCAGATATAGAGAACAAGATGAATACACCATTGAAGATTCATATGATAGGTACCTCCGTTAAGAAGCTGCCAAATTCAGTTGGTAATCTTACTGGACTTGTTTCAATGGACATGCAATATAGCGAGAATCTTGAATATCTACCGAGTAGCTTATTCAAGTTACCAAATGTTGTTGCTTTTGACTTTGGAGGTTGTTCTAAACTTGGTGAATCTTTCAAAATATTTCTACCTCATAGCCCTTCAACATTAAAAATAATGCATTTTGAGGAAAGTGGTTTGTCAGATGAAGATGTGCAGGCAATTCTCATATGTTTTCCAAAATTAGAAGAATTGATTGTATATAAAAATAATTTGGTCTCTCTGCCAGCTTGCATTAAAGAGTCTGCTCACTTGGCAAATCTTGATGTTAGTGATTGCAAAAAGCTTAAAGAAATTCCCGAATGCACCAACTTGAGAATTATGAATGTCCATGGTTGTATGGGTCTTGCACACATTTCTGAGTTGCCATGCACTATTAAAAAAATAGATGCAAGAAAATGCTTCAACTTTTCTTCAGAGACATCAAACATGCTATGGGATCAGGTGAAAAAAGAGGGGCATGTATTAGAAATTGTGATGCCTGGAGACAAGGTTCCAAAATGGTTTAATTATATATGCAAAGATGGAATTCCGTGTTTTTGGGTACGTGAGGAATTTCCTAATGTTGTTTTAGCATTGGTATTCCAATATGCGGATGGGAAGGAAAGAATAAATGATCACGATCATGTTCAACTTCATTTGGTTATCAACGGTCAATTAGTTCCTCACAAAGACTATAACAACTTCATAATTGAACCGCATCATGTTTTAGTTTGTGATCTACGACTCTTATATAATGACGAGGAGTGGTTAAGCATTGATGCATTACTTCAAAAGCATGAATGGAATCAAGTGCAAATTTCATATGAGTTCGAGTACAGTCATGTGACACTAAGTGAATGGGGAGTTTATGTGTACAAACAAGGAACTGATAGCTTGGAAGCTGTTAACTTGAATGAACAGTCGGATGAAAAAATAAAAGCATGGACAGCAGCATTGTTTCAAGTGGCAGACTTTGAAGGTCACCACATCCACACCGGGCACGAAATCGATCATGTTAAAGAGATTGCCGGAAAGGTCGGCGCCAATATAGCTCCTAAACCTTCATTTGTTAAGTATCCGGTTGGACTTGATCAACGCATAGAAGAGGTGAAGTCACTTCTAGACTTGAAGCCAAATGACAATACTGTAAGCGTTTTGAGCATAGTTGGAGTTGGCGGAATAGGGAAAACTGAACTTGCCAAAGCATTACCCACCACCAGCCACCAACAGAATTTGCATCCAAATCCCATTAACCGGTCCCCACCATCACCATCACCACAGAGAACTGCAGCAGCACCACCTCGCCGGAGCCGGAGCGAAAACTCCAAACGAAAACAGCAACATCATCATCAACCCAACACCAACGCACGAAACGGTAAACACGACCCCAAAAGGGTTTACTTCACCACCACCTCAGCTCCACCGCCACCGCCTAAACAGAGGCCTCCACCTCCACTAACATCCACCACGCACCACCACCACCTACCACCACCAAGATTCCAAAAACGCACCCTTCCAGCACCACCACCACTGAGAGGGAAGCCTCAGCTGCTCTACTCCATCACCAAAACCGATAAAAACGTGAACACAGTAGCACCAAAAGCTACCTAA 2532 0.4017 MANYEEQSDALSEVTNLKGHHYHIHKGNEIDHVKKIAEKVHAKIAPKPLLVGEKPVGLDQRIEEVKSLLDLKPKDDTDMGREIIRQEEPNNPAKRSRLWLQEEVINVLSANDSGSDAIQGIVLYPPKRITDPKHLPNYLRLLDWKFYPSKTFPPKFYPKDVIILKLPNGRLKLEEPFKQFSCLTVMNFSNNKSITTMPDVSEVENLRELRLDYCLNLTMVHESIGFLEHLVHLSASECKKLEIFLKSMFLPSLEVLKLDWCEKLEHFPDIENKMNTPLKIHMIGTSVKKLPNSVGNLTGLVSMDMQYSENLEYLPSSLFKLPNVVAFDFGGCSKLGESFKIFLPHSPSTLKIMHFEESGLSDEDVQAILICFPKLEELIVYKNNLVSLPACIKESAHLANLDVSDCKKLKEIPECTNLRIMNVHGCMGLAHISELPCTIKKIDARKCFNFSSETSNMLWDQVKKEGHVLEIVMPGDKVPKWFNYICKDGIPCFWVREEFPNVVLALVFQYADGKERINDHDHVQLHLVINGQLVPHKDYNNFIIEPHHVLVCDLRLLYNDEEWLSIDALLQKHEWNQVQISYEFEYSHVTLSEWGVYVYKQGTDSLEAVNLNEQSDEKIKAWTAALFQVADFEGHHIHTGHEIDHVKEIAGKVGANIAPKPSFVKYPVGLDQRIEEVKSLLDLKPNDNTVSVLSIVGVGGIGKTELAKALPTTSHQQNLHPNPINRSPPSPSPQRTAAAPPRRSRSENSKRKQQHHHQPNTNARNGKHDPKRVYFTTTSAPPPPPKQRPPPPLTSTTHHHHLPPPRFQKRTLPAPPPLRGKPQLLYSITKTDKNVNTVAPKAT 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04813 843 Gene3D Ribonuclease Inhibitor 132 280 IPR032675 -
Trre9g04813 843 Gene3D Ribonuclease Inhibitor 281 466 IPR032675 -
Trre9g04813 843 MobiDBLite consensus disorder prediction 777 798 - -
Trre9g04813 843 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 663 713 IPR027417 -
Trre9g04813 843 SUPERFAMILY L domain-like 118 448 - -
Trre9g04813 843 MobiDBLite consensus disorder prediction 710 824 - -
Trre9g04813 843 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 577 715 IPR044974 GO:0006952
Trre9g04813 843 Gene3D - 655 722 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04813 Trre-Chr9 54804809 54813222 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04813 66 368 WRKY Transcription Factor Family AT4G12020 31.818 9.59e-33 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04813 - - tpra:123882301 669.463