Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04811 ATGGAAGAGCCATTTAAGAACTTTTCATATTTGACTGTCATGGATTTCTCATTTAATGGATCTATCACAACATTGCCTGATTTGTCCAAAGTTGAAAATTTGAGAGAATTGCGACTTGATAATTGCATGGAAAATTGTACCCGAAAACTCGAATATCTACCAAGTTGTTTTCTCAGTTTACCAAATGTTGATGATTGTCACTTTGGAAATTGTCCTAAACTTGGTGGATCTTTCAGAAGAATTCAACCTGATAACCCTTCAGAAGCCAATGAACGTTCAAAATTAAAACAGTTTCGGTGTTACAATAGTGGTTTGTTAGATGAAGATATTCAGAAAATTCTTTTATATAATCCAAACATAGAAATATTGGATGTACCAGGCAACAATTTTGTCAATCTCCAAACGGGCATTAAAGAGTCCAATCACTTGACATATCTTGATCTCAATGGTTGCGTAGAGCTTCAAAATATTCCCAAATGCACCAACTTGAGACATCTTCATGTCAATGGTTGTACGAGTCTTGCACACATTTCAGAGTTGCCATGCACAATTCAAACAATAAATGCAAGCTATTGCTTCAACTTTTCTTTGGAGACATCAGACATGCTATGGGATCAGGTAAAAAACGAGAGGTCTGAATTAGAACATATTTTGATGCCTACAGTCGAAGTTCCAAAATGGTTTGATTATAGATGCAAAGGAGAATTACCGGTTTTTTGGGTTCGTGGGAAGTTTCCCAAAGTTGTTTTAGCATTGGTGTTCGAAGATGCGGTGGAGCAAACATATGCTGTTAGTTTGCATGTTGAATTAATCCCATATATCAACGGCCGACGTGTCCCTTCGTTAGGCGTTTGCAAGTTCCAGATTGCACGGAATCATGTTATAGTTTGTGATCTACATGTCTTATTCAATAACGCAAGCATTGATGCATTACTTAAGCATGAATGGAATGAAGTGCAAATTGAATGTGAAGTCAATGAAAGGACATATGAATTGGATAAAACCGAAGACTATTACGTAAAACTAAGTGAATGGGGAGTTTATGTGTACAAACAAGGAACTGTTAACTGGAAAGAACATGTTCAATTCACGTGTCCTACGAAGGATCCAAATATGACGATAGAGGATTCCAATGATGCTTCTGTTAATGAAAATCATGATGATAAAATAATTGGCATAGAGGATATAATTCCTAGTCCTACTGCTCCAGAAGTACTTGATGAAACTGATCAGGACACTCCTATGTTTGAAGAGAACAAGGAACATGTTACTCATGAGGATTCCAATGATGCTTCTGTTAATGAACATGAAAATCATGATGACAAAATAATTGGAATAGAGGATCCAGAAGTTGGTGAAATTCAGGACACTCCTTACCCCTCTGGTTTCTTCTGGAGGCTTTTGTACACTTGTTTTTGTAAGTGTTTCGCTTAA 1434 0.3661 MEEPFKNFSYLTVMDFSFNGSITTLPDLSKVENLRELRLDNCMENCTRKLEYLPSCFLSLPNVDDCHFGNCPKLGGSFRRIQPDNPSEANERSKLKQFRCYNSGLLDEDIQKILLYNPNIEILDVPGNNFVNLQTGIKESNHLTYLDLNGCVELQNIPKCTNLRHLHVNGCTSLAHISELPCTIQTINASYCFNFSLETSDMLWDQVKNERSELEHILMPTVEVPKWFDYRCKGELPVFWVRGKFPKVVLALVFEDAVEQTYAVSLHVELIPYINGRRVPSLGVCKFQIARNHVIVCDLHVLFNNASIDALLKHEWNEVQIECEVNERTYELDKTEDYYVKLSEWGVYVYKQGTVNWKEHVQFTCPTKDPNMTIEDSNDASVNENHDDKIIGIEDIIPSPTAPEVLDETDQDTPMFEENKEHVTHEDSNDASVNEHENHDDKIIGIEDPEVGEIQDTPYPSGFFWRLLYTCFCKCFA 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04811 477 Gene3D Ribonuclease Inhibitor 70 202 IPR032675 -
Trre9g04811 477 Gene3D Ribonuclease Inhibitor 2 64 IPR032675 -
Trre9g04811 477 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 93 176 - -
Trre9g04811 477 SUPERFAMILY RNI-like 4 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04811 Trre-Chr9 54777674 54784198 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04811 11 189 WRKY Transcription Factor Family AT4G12020 26.471 5.13e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04811 - - tpra:123882297 563.918