Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04810 ATGGTTGCTCATCAGAAGAGGTTTGGAAAAGACTCGGAAAAAATAAAAGCATGGACAGCAGCATTGTCTGACGTGGCAAACTTGAAAGGTCACCATATCGACACTGGGCACGAAATCGATCACGTTAAAGAGATTGCCGAAAAGCTCCATGCTAATATAGCTCCTAAACCTTTACTTGTGGGTGAGAATCCAGTTGGACTTGATCAACACGTAGAAGAGCAATTTAAATATTTGACTGTCATGAATTTCTCATTTAACCAATCTATCACAACAATGCCGGATGTGTCCAAAGTTGAAAAATTGAGAGAATTGCGACTTGATGATTGTGAGAACTTAACTACAGTTCATGAATCCATTGGATTTCTCAAACATCTTGTCCACTTAAGCGTTTCGGGATGCACCAAACTTGAACATTTTCTGCAAAGAATGTTTTTACCATCTCTAGAAGTTCTTAAACTTGATTGGTGCGAAAAACTTGAACACTTCCCAGATATAGAGAAAGAGATTAATACACCATTGAAGTTTCATATGATGGGTACCTCTATTAAGAAGCTGCCAAATTCAGTTGGTAATCTTATTGGACTTGTTTCAATGGACATGCAATATAGTGAGAATCTCGAATATCTACCAAGTAGCTTATTTAAGTTACCAAATGTTGTTTCTTTTGACTTTGGAAGTTGTTCTAAACTTGGTGAATCTTTCAAAACATTTCTACCTCAAAGCCCTTTAGAAGACAGTGAACGTTCAACATTAAAAATAATGCATTTTGAAGAAAGTGGTTTGTTAGATGAAGATATTGAGGCAATTCTCACATGTTTTCCAAAATTAGAAGAATTGATTGTATATAAAAATAATTTGGTCTCTCTGCCAGCGTGCATTAAAAAGTCTGCTCACTTGACAAATCTTGATGTTAGTGATTGTAAAAAGCTTAAAGAAATTCCTGAATGCACCAACTTGAGAATTCTTAATGTCCATGGTTGTATAAGTCTTACACACATTTCAGAGTTGCCATGCACTTTTCGAAAAATAGATGCAAGAAAATGCTTCAACTTTTCTTCAGAGACATCAAACATGCTATGGGATCAGGTAAAAAAAGAGGGGCATGTATTAGAAATTGTGATGCCTGGAGACAAGGTTCCAAAATGGTTTAATTATATATGCAAAGATGGAATTCCGTGTATTTGGGTACGTGAGGAATTTCATAATGTTGTTTTAGCATTGGTATTCCAATATGCGGATGGGAAGGAAAGAATAAATGATCACGATCATGTTCAACTTCATTTGGTTATCAACGGTCAATTAGTCCCTCACGAAGACTATAACAACTTCATAATTGAACCGCATCATGTTTTAGTTTGTGATCTACGACTCTTATACAATGACGAGGAGTGGTTAAGCATTGATGCATTACTTCAAAAGCATGAATGGAATCAAGTGCAAATTTCATATGAGTTCGAGTACAGTCACGTGACACTAAGTGAATGGGGAGTTTTTGTGTACAAACAAGGAACTGATAACTTGGAAGCTGTTAACTTGAATGAACAGTCGGATGGTTTCACCTATGATGATCGGTTTGGAGAAGACTCGGAAAAAATAAAAGAATGGACAGCAGCATTGTCTGAAGTGGCAGACTTTGAAGGTCACCACATCCACACTGGGCACGAAATTGATCATGTTAAAGAGATTGCCAGAAAGGTCGGCGCTAATATAGTTCCTAAACCTTCATTTGTTAAGTATCCGGTTGGACTTGATCAACACATAGAAGAGGTGAAGTCACTTCTAGACTTGAAGCCAAATGACAATACTGATATGGGTAGAGCGATTGTTAGGCAAGAGGCACCATATAACCCGATGAAAGTCATCATCTTAAGTTTGCTTGATAGTCAACTAATTACAATGGAAGAGCCATTTAAGCAATTTATAAATCTGACTGTCATCAAGTTTTCATCTAACCAATTTATCACAACATTTCCGGATGTGTCCAAAGTTGAAAATTTGAGAGAATTGCGACTTGATTATTGTCAGAGTTTAACTACAGTTCATGAATCCATTGGATTTCTCAAACATCTTGTCCACTTAAGCATTTCCGGATGCCATAAACTTGAAAATTTTCTGGAGAGAATGTTTTTACCATCTCTAGAAGTCCTTAAACTTGATTGGTGTCAAAACCTTAAACACTTCCCACATATAGAGAATGAGATGAATACACCATTGAAGATTCATATGATGGATACCTCTATTAAGAAGCTGCCAAATTCAGTTGTTAATCTTCTTGGACTTGTTTCAATGGACATGAAATACAACAAGAATCTCGAATATCTACCAAGTTGTTTATTCAAGTTACCAAATGTTGTTGCTTTTGACTTTGGAGGTTGTTCTAAACTTGGTGAATCTTTTAGAAGATTTCTACCTGCTAGCCCTTCAGAAGACAATGAACGTTCAACATTAAAAGTAATGCATCTTGAAAATTGTGGTTTGTCAAATGAAGATATGCAGCCAATTCTTGTATGTTTTCCAAAATTAGAAGAATTGAATGTATCATATAATTACAACTTGGTCTCTCTTCCGGCGTGCATTGAAGAATCTAATCATTTGAAGAATCTTAATGTCTCTGGTTGTAGGAGTCTTAAACACATTTCAGAGTTGCCATGCACTATTCAAAAAATAGAAGCAAGAGAATGCTTCAACATTTCTTTGAAGACATCACACATGTTATGGGATCAGCTGAAAAAAGAGAGGCATGGATTAGAATTTGTGATTCCCGGATGCTACAAGGTACCAAAATGGTTCGATTATAAATGCAATGAAGGAATTCCATGTTTATGGGTTCGTGGGAAGTTTCCCATTAATGTTGATTTATCATTGGTGTTCCAAGCTGTGGATGGGAAGCAAAGTAAATATTTGTATCTTCATCTTCATTTGGTTATCAACGGTCAATCTGTCCCTCGCAATTCTCACAAAAAGTATTATGACTTCCAAATTGATGTCGACCATGTTATAGTTTGTGATCTACGACTCTTATACAATGACGAGGAGTGGTTAAGCATTGATGCATTACTTCTAAAGCATGAATGGAATCAAGTGCAAATTTCATATGACGCCTCGTACGGATTAACACTAAGTGAATGGGGAGTTTTTGTGAACAAACAAGGAAGAACTGTTAACTTGGAAGAACATGTCCAATTCATGTGTCCTGACCCAACAATGTACTAA 3213 0.3629 MVAHQKRFGKDSEKIKAWTAALSDVANLKGHHIDTGHEIDHVKEIAEKLHANIAPKPLLVGENPVGLDQHVEEQFKYLTVMNFSFNQSITTMPDVSKVEKLRELRLDDCENLTTVHESIGFLKHLVHLSVSGCTKLEHFLQRMFLPSLEVLKLDWCEKLEHFPDIEKEINTPLKFHMMGTSIKKLPNSVGNLIGLVSMDMQYSENLEYLPSSLFKLPNVVSFDFGSCSKLGESFKTFLPQSPLEDSERSTLKIMHFEESGLLDEDIEAILTCFPKLEELIVYKNNLVSLPACIKKSAHLTNLDVSDCKKLKEIPECTNLRILNVHGCISLTHISELPCTFRKIDARKCFNFSSETSNMLWDQVKKEGHVLEIVMPGDKVPKWFNYICKDGIPCIWVREEFHNVVLALVFQYADGKERINDHDHVQLHLVINGQLVPHEDYNNFIIEPHHVLVCDLRLLYNDEEWLSIDALLQKHEWNQVQISYEFEYSHVTLSEWGVFVYKQGTDNLEAVNLNEQSDGFTYDDRFGEDSEKIKEWTAALSEVADFEGHHIHTGHEIDHVKEIARKVGANIVPKPSFVKYPVGLDQHIEEVKSLLDLKPNDNTDMGRAIVRQEAPYNPMKVIILSLLDSQLITMEEPFKQFINLTVIKFSSNQFITTFPDVSKVENLRELRLDYCQSLTTVHESIGFLKHLVHLSISGCHKLENFLERMFLPSLEVLKLDWCQNLKHFPHIENEMNTPLKIHMMDTSIKKLPNSVVNLLGLVSMDMKYNKNLEYLPSCLFKLPNVVAFDFGGCSKLGESFRRFLPASPSEDNERSTLKVMHLENCGLSNEDMQPILVCFPKLEELNVSYNYNLVSLPACIEESNHLKNLNVSGCRSLKHISELPCTIQKIEARECFNISLKTSHMLWDQLKKERHGLEFVIPGCYKVPKWFDYKCNEGIPCLWVRGKFPINVDLSLVFQAVDGKQSKYLYLHLHLVINGQSVPRNSHKKYYDFQIDVDHVIVCDLRLLYNDEEWLSIDALLLKHEWNQVQISYDASYGLTLSEWGVFVNKQGRTVNLEEHVQFMCPDPTMY 1070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04810 1070 Gene3D Ribonuclease Inhibitor 740 913 IPR032675 -
Trre9g04810 1070 Gene3D Ribonuclease Inhibitor 594 739 IPR032675 -
Trre9g04810 1070 Gene3D Ribonuclease Inhibitor 62 175 IPR032675 -
Trre9g04810 1070 Gene3D Ribonuclease Inhibitor 176 366 IPR032675 -
Trre9g04810 1070 SMART LRR_bac_2 862 882 - -
Trre9g04810 1070 SMART LRR_bac_2 838 858 - -
Trre9g04810 1070 SMART LRR_bac_2 273 292 - -
Trre9g04810 1070 SMART LRR_bac_2 296 316 - -
Trre9g04810 1070 SUPERFAMILY L domain-like 616 881 - -
Trre9g04810 1070 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 36 164 - -
Trre9g04810 1070 SUPERFAMILY RNI-like 68 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04810 Trre-Chr9 54762610 54771517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04810 643 802 WRKY Transcription Factor Family AT4G12020 33.742 1.80e-16 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04810 - - tpra:123882301 547.354